BLASTX nr result
ID: Glycyrrhiza24_contig00028541
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00028541 (420 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003630250.1| Zinc finger CCCH domain-containing protein [... 147 9e-34 gb|AFK43710.1| unknown [Lotus japonicus] 110 1e-22 ref|XP_003602587.1| Zinc finger CCCH domain-containing protein [... 95 5e-18 ref|XP_003528041.1| PREDICTED: zinc finger CCCH domain-containin... 91 1e-16 ref|XP_004148674.1| PREDICTED: zinc finger CCCH domain-containin... 69 4e-10 >ref|XP_003630250.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|355524272|gb|AET04726.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] Length = 779 Score = 147 bits (371), Expect = 9e-34 Identities = 76/99 (76%), Positives = 83/99 (83%) Frame = +1 Query: 124 MSGSSRKLSSKWDSRDEPEFAPDSVANSNSSRWSYLERDDILKPRMGFSCKEPFSGDRGS 303 MSG SRKLSS DSRDEPEF P+SV SNSSR YLER+D LKPRM FS KEPFSG RGS Sbjct: 1 MSGGSRKLSSNRDSRDEPEFPPESVTKSNSSR--YLERNDTLKPRMRFSRKEPFSGVRGS 58 Query: 304 NKDDFKNKDYKVLDATIAQDTDGSYNMEMSPGFEEWKNK 420 NKDD +DY+VLDAT A+DTDGSYNM+MSPGFEEWKN+ Sbjct: 59 NKDD---EDYQVLDATFAKDTDGSYNMKMSPGFEEWKNR 94 >gb|AFK43710.1| unknown [Lotus japonicus] Length = 305 Score = 110 bits (275), Expect = 1e-22 Identities = 62/110 (56%), Positives = 69/110 (62%), Gaps = 11/110 (10%) Frame = +1 Query: 124 MSGSSRKLSSKWDSRDEPEFAPDS-----------VANSNSSRWSYLERDDILKPRMGFS 270 MS RK SSKWD DEPEFAP S VA SNSS+WSY E +D LKP G S Sbjct: 1 MSEGGRKRSSKWDLIDEPEFAPGSKQMRSGRSSADVAGSNSSKWSYSEVNDELKPGKGRS 60 Query: 271 CKEPFSGDRGSNKDDFKNKDYKVLDATIAQDTDGSYNMEMSPGFEEWKNK 420 K+ FSG R SNKD+ NKDY+V DAT+ DTD SY+ MSP EE K K Sbjct: 61 SKDSFSGGRDSNKDNIMNKDYRVSDATMDLDTDRSYSKNMSPLLEERKQK 110 >ref|XP_003602587.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|355491635|gb|AES72838.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] Length = 1084 Score = 95.1 bits (235), Expect = 5e-18 Identities = 50/100 (50%), Positives = 64/100 (64%), Gaps = 11/100 (11%) Frame = +1 Query: 124 MSGSSRKLSSKWDSRDEPEFAPDS-----------VANSNSSRWSYLERDDILKPRMGFS 270 MSG+ RK SSKWD DE +F+P S VA SNSS W+YLE +D L+P GFS Sbjct: 1 MSGTGRKHSSKWDLSDEHKFSPGSKQMRSGRSSADVAGSNSSEWAYLEGNDKLRPVTGFS 60 Query: 271 CKEPFSGDRGSNKDDFKNKDYKVLDATIAQDTDGSYNMEM 390 KE + G RGSN+DD +KD++V ++ DTDGSY+ M Sbjct: 61 SKESYYGGRGSNEDDAMHKDHRVFNSRREWDTDGSYSRNM 100 >ref|XP_003528041.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like [Glycine max] Length = 828 Score = 90.9 bits (224), Expect = 1e-16 Identities = 50/99 (50%), Positives = 61/99 (61%) Frame = +1 Query: 124 MSGSSRKLSSKWDSRDEPEFAPDSVANSNSSRWSYLERDDILKPRMGFSCKEPFSGDRGS 303 MSGS +K SSKWD RD P+F+PD S WS D LK FSG RGS Sbjct: 1 MSGSGKKRSSKWDLRDNPDFSPDDGKQLRSG-WS--SAGDKLKH---------FSGGRGS 48 Query: 304 NKDDFKNKDYKVLDATIAQDTDGSYNMEMSPGFEEWKNK 420 NKD+ NKDY+VLD+T+ D D SY+ +MSPG + WK+K Sbjct: 49 NKDNIMNKDYRVLDSTMEWDEDESYDHKMSPGLDAWKHK 87 >ref|XP_004148674.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like [Cucumis sativus] Length = 873 Score = 68.9 bits (167), Expect = 4e-10 Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 24/121 (19%) Frame = +1 Query: 124 MSGSSRKLSSKWDSRDE-------------------PEFAPDSVANSNSSRWSYLERDD- 243 MSGS RK +SKWD R++ P + +A + S+WS +E + Sbjct: 1 MSGSGRKRTSKWDLREDSHVETDIAQEHGWPGKESRPGWISPELAGDDGSKWSGMETTNG 60 Query: 244 ILKPRM--GFSCKEPFSGDRGSNKDDFKNKDY-KVLDATIAQDTDG-SYNMEMSPGFEEW 411 I KP+ G +EPF G R S+K+D+ +K Y K L+ T D D SY+ MSPG +EW Sbjct: 61 ISKPKQDWGLLLEEPFPGTRASHKEDYTSKGYNKDLEGTAEWDADDKSYSTRMSPGLDEW 120 Query: 412 K 414 + Sbjct: 121 R 121