BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028539
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containi...    54   1e-10

>ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06270-like [Glycine max]
          Length = 342

 Score = 54.3 bits (129), Expect(2) = 1e-10
 Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
 Frame = +3

Query: 177 MVIGSTMHYILILQSPLLLNHCP---STCPLQNLKQAVIAQAETKKHEKIPDVLISLESC 347
           MV+ + MHY  +L    +LN CP   S   LQNL+QAV A+ E K + KIP++LIS ++C
Sbjct: 1   MVMVAMMHYRFLLCFRPILNRCPLGRSVSSLQNLEQAVRAEVEAKNYIKIPELLISSDAC 60

Query: 348 QRSH 359
           Q S+
Sbjct: 61  QISN 64



 Score = 36.2 bits (82), Expect(2) = 1e-10
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = +1

Query: 391 NPRVQIIDAILQSLTPLRPHSKLWRVYS 474
           N RVQI+D +LQSL P+RP SK    YS
Sbjct: 75  NIRVQIVDEMLQSLIPIRPRSKAQLTYS 102