BLASTX nr result

ID: Glycyrrhiza24_contig00028534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028534
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545205.1| PREDICTED: uncharacterized protein LOC100803...    92   6e-17
ref|XP_002520546.1| conserved hypothetical protein [Ricinus comm...    77   2e-12
ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_003616838.1| hypothetical protein MTR_5g084810 [Medicago ...    72   4e-11
ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242...    66   3e-09

>ref|XP_003545205.1| PREDICTED: uncharacterized protein LOC100803162 [Glycine max]
          Length = 564

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/78 (58%), Positives = 60/78 (76%), Gaps = 7/78 (8%)
 Frame = +3

Query: 81  LKVQAFRGSKATHVPAISPVNSI-------RVSRSVRTEAQHVLMDYLHSTRGYSFLDAE 239
           LKV+ FR S+   +P+ SP++S+       RVSR +R+EAQH LMDY+HSTRGY+F DAE
Sbjct: 16  LKVRCFRASEPIPLPSSSPLSSVLSSRSPKRVSRLLRSEAQHALMDYMHSTRGYTFSDAE 75

Query: 240 YISKNSPNFVESLVSKIN 293
           YIS+NSP F+ESLVS I+
Sbjct: 76  YISENSPRFIESLVSMID 93


>ref|XP_002520546.1| conserved hypothetical protein [Ricinus communis]
           gi|223540260|gb|EEF41832.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 374

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/106 (43%), Positives = 60/106 (56%), Gaps = 9/106 (8%)
 Frame = +3

Query: 3   LNRFFLFHPSLHXXXXXXXXXXXXXFLKVQAFRGSKATHVPAISPVNSI---------RV 155
           LN F  F P +               LKV+ F  ++ TH P IS   S          RV
Sbjct: 5   LNHFLAFSP-VFFEKSNPTQNPCFLLLKVRFFSSARLTHNPKISHSESTESLISLSGNRV 63

Query: 156 SRSVRTEAQHVLMDYLHSTRGYSFLDAEYISKNSPNFVESLVSKIN 293
           SR+VR EAQ VL +YLHSTR +SF DA++ISKNSP+F++ L+ KI+
Sbjct: 64  SRTVRAEAQDVLFEYLHSTRSFSFTDADHISKNSPHFLQQLLFKID 109


>ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|222875180|gb|EEF12311.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 9/80 (11%)
 Frame = +3

Query: 81  LKVQAFRGSKATH---------VPAISPVNSIRVSRSVRTEAQHVLMDYLHSTRGYSFLD 233
           LKVQ F  S+++          V ++  ++S RVSR  RT+AQ VL DYLH TR + F D
Sbjct: 30  LKVQCFCSSRSSQNAKVSHSGSVQSLVTLHSTRVSRVARTDAQRVLFDYLHCTRNFDFND 89

Query: 234 AEYISKNSPNFVESLVSKIN 293
           AE+ISKNSP+F+E+L++KI+
Sbjct: 90  AEHISKNSPHFIENLLTKID 109


>ref|XP_003616838.1| hypothetical protein MTR_5g084810 [Medicago truncatula]
           gi|355518173|gb|AES99796.1| hypothetical protein
           MTR_5g084810 [Medicago truncatula]
          Length = 592

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/63 (52%), Positives = 48/63 (76%)
 Frame = +3

Query: 105 SKATHVPAISPVNSIRVSRSVRTEAQHVLMDYLHSTRGYSFLDAEYISKNSPNFVESLVS 284
           SK+T +PA+SP   I + R+ + +AQ  L +YLH T+ Y+F DAE+ISKNSP+F++ L+S
Sbjct: 54  SKSTQIPALSP--PIYIKRATKIQAQRALFEYLHYTQNYTFSDAEFISKNSPHFIDFLIS 111

Query: 285 KIN 293
           KIN
Sbjct: 112 KIN 114


>ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242606 [Vitis vinifera]
          Length = 564

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/60 (53%), Positives = 43/60 (71%)
 Frame = +3

Query: 111 ATHVPAISPVNSIRVSRSVRTEAQHVLMDYLHSTRGYSFLDAEYISKNSPNFVESLVSKI 290
           A ++   S +   RVSR VRTEAQ VL DYLH TR +   DAE++SKNSP+F++ L+SK+
Sbjct: 37  ANYLKLESSIPGRRVSRVVRTEAQDVLFDYLHCTRSFHLTDAEHMSKNSPHFLQKLLSKV 96


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