BLASTX nr result

ID: Glycyrrhiza24_contig00028524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028524
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543868.1| PREDICTED: nipped-B-like protein-like [Glyci...   196   1e-48
ref|XP_003618719.1| Sister chromatid cohesion [Medicago truncatu...   193   1e-47
ref|XP_002279278.2| PREDICTED: nipped-B-like protein-like [Vitis...   190   1e-46
emb|CBI22299.3| unnamed protein product [Vitis vinifera]              190   1e-46
ref|XP_004156556.1| PREDICTED: LOW QUALITY PROTEIN: nipped-B-lik...   187   6e-46

>ref|XP_003543868.1| PREDICTED: nipped-B-like protein-like [Glycine max]
          Length = 1723

 Score =  196 bits (499), Expect = 1e-48
 Identities = 97/105 (92%), Positives = 101/105 (96%)
 Frame = -1

Query: 316  FKYFEKIAERIKDTGVSVRKRAIKIIRDMCSSNANFSGFTRACTEIISRVSDDESSIQDL 137
            FKYFEKIAERIKDTGVSVRKRAIKIIRDMC+SNANFSGFTRACTEIISRVSDDE+SIQDL
Sbjct: 870  FKYFEKIAERIKDTGVSVRKRAIKIIRDMCTSNANFSGFTRACTEIISRVSDDEASIQDL 929

Query: 136  VCKTFYEFWFEEPSATQTQVFGDGSTVPLEVAKKTEQIVEMLRRM 2
            VCKTF EFWFEEP A+QTQVFGDGSTVPLE+ KKTEQIVEMLR M
Sbjct: 930  VCKTFSEFWFEEPPASQTQVFGDGSTVPLEIVKKTEQIVEMLRGM 974


>ref|XP_003618719.1| Sister chromatid cohesion [Medicago truncatula]
            gi|355493734|gb|AES74937.1| Sister chromatid cohesion
            [Medicago truncatula]
          Length = 1167

 Score =  193 bits (490), Expect = 1e-47
 Identities = 95/105 (90%), Positives = 99/105 (94%)
 Frame = -1

Query: 316  FKYFEKIAERIKDTGVSVRKRAIKIIRDMCSSNANFSGFTRACTEIISRVSDDESSIQDL 137
            FKYFEKI ERIKDTGVSVRKRAIKIIRDMC S+ NFSGFTRACTEIISRV+DDESSIQDL
Sbjct: 922  FKYFEKITERIKDTGVSVRKRAIKIIRDMCCSDGNFSGFTRACTEIISRVTDDESSIQDL 981

Query: 136  VCKTFYEFWFEEPSATQTQVFGDGSTVPLEVAKKTEQIVEMLRRM 2
            VCKTFYEFWFEEPS  QTQVF DGSTVPLEVAKKTEQIVEML+R+
Sbjct: 982  VCKTFYEFWFEEPSTPQTQVFKDGSTVPLEVAKKTEQIVEMLKRL 1026


>ref|XP_002279278.2| PREDICTED: nipped-B-like protein-like [Vitis vinifera]
          Length = 1967

 Score =  190 bits (482), Expect = 1e-46
 Identities = 93/104 (89%), Positives = 99/104 (95%)
 Frame = -1

Query: 313  KYFEKIAERIKDTGVSVRKRAIKIIRDMCSSNANFSGFTRACTEIISRVSDDESSIQDLV 134
            KYFEK+AERIKDTGVSVRKRAIKIIRDMC+SNANFS FT AC EIISRVSD+ESSIQDLV
Sbjct: 1114 KYFEKVAERIKDTGVSVRKRAIKIIRDMCTSNANFSEFTSACNEIISRVSDEESSIQDLV 1173

Query: 133  CKTFYEFWFEEPSATQTQVFGDGSTVPLEVAKKTEQIVEMLRRM 2
            CKTFYEFWFEEPS +QTQ FGDGS+VPLEVAKKTEQIVEMLR+M
Sbjct: 1174 CKTFYEFWFEEPSGSQTQFFGDGSSVPLEVAKKTEQIVEMLRKM 1217


>emb|CBI22299.3| unnamed protein product [Vitis vinifera]
          Length = 1748

 Score =  190 bits (482), Expect = 1e-46
 Identities = 93/104 (89%), Positives = 99/104 (95%)
 Frame = -1

Query: 313  KYFEKIAERIKDTGVSVRKRAIKIIRDMCSSNANFSGFTRACTEIISRVSDDESSIQDLV 134
            KYFEK+AERIKDTGVSVRKRAIKIIRDMC+SNANFS FT AC EIISRVSD+ESSIQDLV
Sbjct: 868  KYFEKVAERIKDTGVSVRKRAIKIIRDMCTSNANFSEFTSACNEIISRVSDEESSIQDLV 927

Query: 133  CKTFYEFWFEEPSATQTQVFGDGSTVPLEVAKKTEQIVEMLRRM 2
            CKTFYEFWFEEPS +QTQ FGDGS+VPLEVAKKTEQIVEMLR+M
Sbjct: 928  CKTFYEFWFEEPSGSQTQFFGDGSSVPLEVAKKTEQIVEMLRKM 971


>ref|XP_004156556.1| PREDICTED: LOW QUALITY PROTEIN: nipped-B-like protein-like [Cucumis
            sativus]
          Length = 1819

 Score =  187 bits (476), Expect = 6e-46
 Identities = 90/105 (85%), Positives = 100/105 (95%)
 Frame = -1

Query: 316  FKYFEKIAERIKDTGVSVRKRAIKIIRDMCSSNANFSGFTRACTEIISRVSDDESSIQDL 137
            FKYFEKI+ER+KDTGVSVRKRAIKIIRDMC+SNANF+ FTRAC EIISRV DDESSIQDL
Sbjct: 919  FKYFEKISERVKDTGVSVRKRAIKIIRDMCTSNANFAEFTRACIEIISRVGDDESSIQDL 978

Query: 136  VCKTFYEFWFEEPSATQTQVFGDGSTVPLEVAKKTEQIVEMLRRM 2
            VCKTFYEFWFEEPS++QTQ FGD S+VPLE+AKKTEQIVE+LR+M
Sbjct: 979  VCKTFYEFWFEEPSSSQTQFFGDDSSVPLEIAKKTEQIVEILRKM 1023


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