BLASTX nr result

ID: Glycyrrhiza24_contig00028518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028518
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546529.1| PREDICTED: uncharacterized protein LOC100775...   280   1e-73
ref|XP_003533805.1| PREDICTED: uncharacterized protein LOC100808...   277   6e-73
ref|XP_002516200.1| DNA binding protein, putative [Ricinus commu...   243   1e-62
emb|CBI35803.3| unnamed protein product [Vitis vinifera]              232   2e-59
ref|XP_002277324.1| PREDICTED: AT-rich interactive domain-contai...   229   2e-58

>ref|XP_003546529.1| PREDICTED: uncharacterized protein LOC100775894 [Glycine max]
          Length = 750

 Score =  280 bits (715), Expect = 1e-73
 Identities = 138/166 (83%), Positives = 147/166 (88%)
 Frame = +2

Query: 2   LPHNSRKGGGGKLTPQILGEPPTVDVGPCEADMEEEESSPGTSSAIKIYDDDVNMRFLVC 181
           LP NS KG G KL PQILG PP +DV PC ADM+EEE SP T S++KIYDDDVNMRFL+C
Sbjct: 190 LPSNSHKGAG-KLGPQILGVPPNIDVSPCVADMKEEEGSPETISSLKIYDDDVNMRFLIC 248

Query: 182 GVPCTLDACLLGSLEDGLNALLCTEIRGCKLLNRTSATPPPLQAGTFSRGVVTMRCDIST 361
           GVPCTLDACLLGSLEDGLNALL  EIRGCKL NRTSATPPPLQAGTFSRGVVTMRCDIST
Sbjct: 249 GVPCTLDACLLGSLEDGLNALLFAEIRGCKLHNRTSATPPPLQAGTFSRGVVTMRCDIST 308

Query: 362 CTSAHISLLVSGSAETCFNDQLLENHIKKELTENSQLVQSIPNAEQ 499
           C+SAHISLLVSGSA+TCFNDQLLENHIKKEL E SQLVQ+ PN +Q
Sbjct: 309 CSSAHISLLVSGSADTCFNDQLLENHIKKELIEKSQLVQAFPNHQQ 354


>ref|XP_003533805.1| PREDICTED: uncharacterized protein LOC100808357 [Glycine max]
          Length = 752

 Score =  277 bits (709), Expect = 6e-73
 Identities = 140/167 (83%), Positives = 146/167 (87%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   LPHNSRKGGGGKLTPQILGEPPTVDVGPCEADM-EEEESSPGTSSAIKIYDDDVNMRFLV 178
           LP N  KG G KL PQILG PP +DV PC ADM EEEE SP T SA+KIYDDDVNMRFL+
Sbjct: 191 LPSNCHKGAG-KLGPQILGVPPNIDVSPCVADMKEEEEDSPETISAVKIYDDDVNMRFLI 249

Query: 179 CGVPCTLDACLLGSLEDGLNALLCTEIRGCKLLNRTSATPPPLQAGTFSRGVVTMRCDIS 358
           CGVPCTLDACLLGSLEDGLNALL  EIRGCKL NRTSATPPPLQAGTFSRGVVTMRCDIS
Sbjct: 250 CGVPCTLDACLLGSLEDGLNALLFAEIRGCKLHNRTSATPPPLQAGTFSRGVVTMRCDIS 309

Query: 359 TCTSAHISLLVSGSAETCFNDQLLENHIKKELTENSQLVQSIPNAEQ 499
           TC+SAHISLLVSGSA+TCFNDQLLENHIKKEL E SQLVQ+ PN EQ
Sbjct: 310 TCSSAHISLLVSGSADTCFNDQLLENHIKKELIEKSQLVQAFPNHEQ 356


>ref|XP_002516200.1| DNA binding protein, putative [Ricinus communis]
           gi|223544686|gb|EEF46202.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 749

 Score =  243 bits (620), Expect = 1e-62
 Identities = 120/157 (76%), Positives = 136/157 (86%)
 Frame = +2

Query: 29  GGKLTPQILGEPPTVDVGPCEADMEEEESSPGTSSAIKIYDDDVNMRFLVCGVPCTLDAC 208
           GGK  P++LGEPP +D+   EAD+++EESS GT  AIKIYDDDV MRFLVC +P TLDAC
Sbjct: 197 GGKPGPRLLGEPPKIDITLPEADVQDEESSSGTLPAIKIYDDDVTMRFLVCELPSTLDAC 256

Query: 209 LLGSLEDGLNALLCTEIRGCKLLNRTSATPPPLQAGTFSRGVVTMRCDISTCTSAHISLL 388
           LLGSLEDGLNALL  EIRG KL NRTSA PPPLQAGTFSRGVVTMRCD+STC+SAHISLL
Sbjct: 257 LLGSLEDGLNALLNIEIRGSKLHNRTSAPPPPLQAGTFSRGVVTMRCDLSTCSSAHISLL 316

Query: 389 VSGSAETCFNDQLLENHIKKELTENSQLVQSIPNAEQ 499
           VSGSA+ CFNDQLLENHIK EL ENSQLV ++P++E+
Sbjct: 317 VSGSAQACFNDQLLENHIKNELIENSQLVHALPSSEE 353


>emb|CBI35803.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  232 bits (592), Expect = 2e-59
 Identities = 120/166 (72%), Positives = 136/166 (81%), Gaps = 1/166 (0%)
 Frame = +2

Query: 2   LPHNSRKGGGGKLTPQILGEPPTVDVGPCEADM-EEEESSPGTSSAIKIYDDDVNMRFLV 178
           LP NS K  G KL P++LG+P T+DV P E D  E+EE S GT  AIKIYDDDV +RFLV
Sbjct: 188 LPANSHKVSG-KLGPRLLGDPATIDVPPPEVDAGEDEEGSLGTLPAIKIYDDDVGIRFLV 246

Query: 179 CGVPCTLDACLLGSLEDGLNALLCTEIRGCKLLNRTSATPPPLQAGTFSRGVVTMRCDIS 358
           CG PC LD+CL  SLEDGLNALL  EIRG KL NR SA PPPLQAGTFSRGVVTMRCD+S
Sbjct: 247 CGEPCMLDSCLFESLEDGLNALLSIEIRGSKLHNRVSAPPPPLQAGTFSRGVVTMRCDLS 306

Query: 359 TCTSAHISLLVSGSAETCFNDQLLENHIKKELTENSQLVQSIPNAE 496
           TC+SAHISLLVSGSA+TCF+DQLLEN+IKKE+TE SQLV ++P +E
Sbjct: 307 TCSSAHISLLVSGSAQTCFDDQLLENNIKKEVTEQSQLVHALPYSE 352


>ref|XP_002277324.1| PREDICTED: AT-rich interactive domain-containing protein 4 [Vitis
           vinifera] gi|297738501|emb|CBI27746.3| unnamed protein
           product [Vitis vinifera]
          Length = 739

 Score =  229 bits (583), Expect = 2e-58
 Identities = 117/166 (70%), Positives = 134/166 (80%)
 Frame = +2

Query: 2   LPHNSRKGGGGKLTPQILGEPPTVDVGPCEADMEEEESSPGTSSAIKIYDDDVNMRFLVC 181
           +P N++K  G KL P +LG+PP ++V P E D  EEES P T   IKIYD DV+MRFLVC
Sbjct: 183 VPSNNQKVSG-KLGPCLLGDPPKINVVPPEVD--EEESLPATLPVIKIYDADVSMRFLVC 239

Query: 182 GVPCTLDACLLGSLEDGLNALLCTEIRGCKLLNRTSATPPPLQAGTFSRGVVTMRCDIST 361
           G P  LDACLLGSLEDGLNALLC EIRG KL NR SA PPPLQAGTFSRGVVTMRCD+ST
Sbjct: 240 GAPSALDACLLGSLEDGLNALLCIEIRGSKLHNRVSAPPPPLQAGTFSRGVVTMRCDLST 299

Query: 362 CTSAHISLLVSGSAETCFNDQLLENHIKKELTENSQLVQSIPNAEQ 499
           C+SAHISLLVSGSA+TC NDQLLE++IK EL E SQLV ++P+ E+
Sbjct: 300 CSSAHISLLVSGSAQTCLNDQLLESYIKNELIEKSQLVHAVPSCEE 345


Top