BLASTX nr result

ID: Glycyrrhiza24_contig00028498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028498
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-l...   117   1e-24
ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-l...   116   2e-24
ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communi...    88   6e-16
ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [...    87   2e-15

>ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 514

 Score =  117 bits (293), Expect = 1e-24
 Identities = 62/98 (63%), Positives = 63/98 (64%), Gaps = 12/98 (12%)
 Frame = -3

Query: 260 MAEHSSAAVNDGEPESQLXXXXXXXXXXXXXXXK------------SSDPELFCCLLQPA 117
           M E  SAAVNDGEPE Q                             +SDPELFCCLLQPA
Sbjct: 1   MDEQKSAAVNDGEPEPQQNHHQQNHTDNNNNKSNDTENNNNDNEKSTSDPELFCCLLQPA 60

Query: 116 TADADPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYV 3
           T D DPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYV
Sbjct: 61  TTDGDPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYV 98


>ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 553

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/90 (66%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
 Frame = -3

Query: 260 MAEHSSAAVNDGEPESQLXXXXXXXXXXXXXXXKS----SDPELFCCLLQPATADADPEY 93
           MAE +SAA NDGEPE +                 +    SDPELFCCLLQPATA+ DPEY
Sbjct: 1   MAEQTSAAFNDGEPEPRQNEHHQNHNNNKSNDTDNERSTSDPELFCCLLQPATAEGDPEY 60

Query: 92  IGIRRLLLHRKAEAGVLRRRDWRCNGKTYV 3
           IGIRRLLL RKAEAGVLRRRDWRCNGKTYV
Sbjct: 61  IGIRRLLLSRKAEAGVLRRRDWRCNGKTYV 90


>ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|222849089|gb|EEE86636.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = -3

Query: 152 DPELFCCLLQPATADADPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTY 6
           DPELF CLLQP T+D+DP+YIGIRRLLL+RKAE+GV RR DWRCNGK Y
Sbjct: 47  DPELFSCLLQPVTSDSDPDYIGIRRLLLYRKAESGVRRRLDWRCNGKGY 95


>ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communis]
           gi|223547972|gb|EEF49464.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 500

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 39/50 (78%), Positives = 44/50 (88%)
 Frame = -3

Query: 152 DPELFCCLLQPATADADPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYV 3
           DPELF CLLQP T D+DPEYIGIRRLLL+RK+++GV RR DWRCNGK YV
Sbjct: 39  DPELFSCLLQPVTTDSDPEYIGIRRLLLYRKSDSGVNRRLDWRCNGKGYV 88


>ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera]
           gi|297744762|emb|CBI38024.3| unnamed protein product
           [Vitis vinifera]
          Length = 477

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 38/50 (76%), Positives = 44/50 (88%)
 Frame = -3

Query: 152 DPELFCCLLQPATADADPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYV 3
           DP  F CLLQP++AD+DP+YIGIRRLLL RKAE+GV RR+DWRCNGK YV
Sbjct: 21  DPTFFSCLLQPSSADSDPQYIGIRRLLLRRKAESGVHRRKDWRCNGKGYV 70