BLASTX nr result
ID: Glycyrrhiza24_contig00028498
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00028498 (385 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-l... 117 1e-24 ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-l... 116 2e-24 ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|2... 89 5e-16 ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communi... 88 6e-16 ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [... 87 2e-15 >ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max] Length = 514 Score = 117 bits (293), Expect = 1e-24 Identities = 62/98 (63%), Positives = 63/98 (64%), Gaps = 12/98 (12%) Frame = -3 Query: 260 MAEHSSAAVNDGEPESQLXXXXXXXXXXXXXXXK------------SSDPELFCCLLQPA 117 M E SAAVNDGEPE Q +SDPELFCCLLQPA Sbjct: 1 MDEQKSAAVNDGEPEPQQNHHQQNHTDNNNNKSNDTENNNNDNEKSTSDPELFCCLLQPA 60 Query: 116 TADADPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYV 3 T D DPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYV Sbjct: 61 TTDGDPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYV 98 >ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max] Length = 553 Score = 116 bits (290), Expect = 2e-24 Identities = 60/90 (66%), Positives = 64/90 (71%), Gaps = 4/90 (4%) Frame = -3 Query: 260 MAEHSSAAVNDGEPESQLXXXXXXXXXXXXXXXKS----SDPELFCCLLQPATADADPEY 93 MAE +SAA NDGEPE + + SDPELFCCLLQPATA+ DPEY Sbjct: 1 MAEQTSAAFNDGEPEPRQNEHHQNHNNNKSNDTDNERSTSDPELFCCLLQPATAEGDPEY 60 Query: 92 IGIRRLLLHRKAEAGVLRRRDWRCNGKTYV 3 IGIRRLLL RKAEAGVLRRRDWRCNGKTYV Sbjct: 61 IGIRRLLLSRKAEAGVLRRRDWRCNGKTYV 90 >ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|222849089|gb|EEE86636.1| predicted protein [Populus trichocarpa] Length = 508 Score = 88.6 bits (218), Expect = 5e-16 Identities = 39/49 (79%), Positives = 44/49 (89%) Frame = -3 Query: 152 DPELFCCLLQPATADADPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTY 6 DPELF CLLQP T+D+DP+YIGIRRLLL+RKAE+GV RR DWRCNGK Y Sbjct: 47 DPELFSCLLQPVTSDSDPDYIGIRRLLLYRKAESGVRRRLDWRCNGKGY 95 >ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communis] gi|223547972|gb|EEF49464.1| WD-repeat protein, putative [Ricinus communis] Length = 500 Score = 88.2 bits (217), Expect = 6e-16 Identities = 39/50 (78%), Positives = 44/50 (88%) Frame = -3 Query: 152 DPELFCCLLQPATADADPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYV 3 DPELF CLLQP T D+DPEYIGIRRLLL+RK+++GV RR DWRCNGK YV Sbjct: 39 DPELFSCLLQPVTTDSDPEYIGIRRLLLYRKSDSGVNRRLDWRCNGKGYV 88 >ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera] gi|297744762|emb|CBI38024.3| unnamed protein product [Vitis vinifera] Length = 477 Score = 86.7 bits (213), Expect = 2e-15 Identities = 38/50 (76%), Positives = 44/50 (88%) Frame = -3 Query: 152 DPELFCCLLQPATADADPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYV 3 DP F CLLQP++AD+DP+YIGIRRLLL RKAE+GV RR+DWRCNGK YV Sbjct: 21 DPTFFSCLLQPSSADSDPQYIGIRRLLLRRKAESGVHRRKDWRCNGKGYV 70