BLASTX nr result

ID: Glycyrrhiza24_contig00028493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028493
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39676.1| unknown [Lotus japonicus]                              115   1e-23
ref|XP_003622327.1| hypothetical protein MTR_7g033080 [Medicago ...   113   4e-23
gb|AFK38106.1| unknown [Medicago truncatula]                          110   2e-22
ref|XP_002298558.1| predicted protein [Populus trichocarpa] gi|2...    79   9e-13
ref|XP_002526973.1| conserved hypothetical protein [Ricinus comm...    70   4e-10

>gb|AFK39676.1| unknown [Lotus japonicus]
          Length = 122

 Score =  115 bits (287), Expect = 1e-23
 Identities = 69/126 (54%), Positives = 82/126 (65%), Gaps = 1/126 (0%)
 Frame = +2

Query: 110 MSTIQMASLSKFRYQRLRNEVGFDDERYRV-IQRPTXXXXXXXXXXXXXXXXXXXXXXXX 286
           MS IQ+AS+SKFRYQRL++E G++ ER RV IQRP                         
Sbjct: 1   MSNIQIASVSKFRYQRLKHEGGYEIERDRVLIQRPKSWFRFRFRRIQIRRRFRLKIPSLK 60

Query: 287 XXXXXXXXKARLVSSMRITCAKVMKRFKDGQVHFGDLFAGNYMFMQVNPTSLKYLVEKEI 466
                   + RLVSSMR++ AKV+KRFKD +VHFGDLFAGNY+FMQVNP+SLKYL EKE 
Sbjct: 61  RLWRK---RVRLVSSMRLSYAKVLKRFKDNKVHFGDLFAGNYLFMQVNPSSLKYL-EKEF 116

Query: 467 SFSKIA 484
           S SKIA
Sbjct: 117 SISKIA 122


>ref|XP_003622327.1| hypothetical protein MTR_7g033080 [Medicago truncatula]
           gi|355497342|gb|AES78545.1| hypothetical protein
           MTR_7g033080 [Medicago truncatula]
          Length = 117

 Score =  113 bits (282), Expect = 4e-23
 Identities = 67/125 (53%), Positives = 79/125 (63%)
 Frame = +2

Query: 110 MSTIQMASLSKFRYQRLRNEVGFDDERYRVIQRPTXXXXXXXXXXXXXXXXXXXXXXXXX 289
           MS+IQM S +KF YQ+LR+EV  DDER  VIQRP                          
Sbjct: 1   MSSIQMVSSNKFGYQKLRHEVVLDDER--VIQRPKNFFRFRRIPMRRRFRLKIPSLRRLW 58

Query: 290 XXXXXXXKARLVSSMRITCAKVMKRFKDGQVHFGDLFAGNYMFMQVNPTSLKYLVEKEIS 469
                  K ++VSSMR++CAKV+KRFKDGQVHFGDLFAGNY+FMQVNP+SL YL  K+IS
Sbjct: 59  RK-----KTKVVSSMRVSCAKVVKRFKDGQVHFGDLFAGNYLFMQVNPSSLNYL-GKDIS 112

Query: 470 FSKIA 484
             KIA
Sbjct: 113 IPKIA 117


>gb|AFK38106.1| unknown [Medicago truncatula]
          Length = 117

 Score =  110 bits (276), Expect = 2e-22
 Identities = 66/125 (52%), Positives = 78/125 (62%)
 Frame = +2

Query: 110 MSTIQMASLSKFRYQRLRNEVGFDDERYRVIQRPTXXXXXXXXXXXXXXXXXXXXXXXXX 289
           MS+IQM S +KF YQ+L +EV  DDER  VIQRP                          
Sbjct: 1   MSSIQMVSSNKFGYQKLSHEVVLDDER--VIQRPKNFFRFRRIPMRRRFRLKIPSLRRLW 58

Query: 290 XXXXXXXKARLVSSMRITCAKVMKRFKDGQVHFGDLFAGNYMFMQVNPTSLKYLVEKEIS 469
                  K ++VSSMR++CAKV+KRFKDGQVHFGDLFAGNY+FMQVNP+SL YL  K+IS
Sbjct: 59  RK-----KTKVVSSMRVSCAKVVKRFKDGQVHFGDLFAGNYLFMQVNPSSLNYL-GKDIS 112

Query: 470 FSKIA 484
             KIA
Sbjct: 113 IPKIA 117


>ref|XP_002298558.1| predicted protein [Populus trichocarpa] gi|222845816|gb|EEE83363.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score = 79.0 bits (193), Expect = 9e-13
 Identities = 46/108 (42%), Positives = 58/108 (53%)
 Frame = +2

Query: 125 MASLSKFRYQRLRNEVGFDDERYRVIQRPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304
           MA   KF Y +L++E GF DE Y    R                                
Sbjct: 1   MAKGPKFPYHKLKHE-GFCDE-YEERHRFNIVKSRRWYGFRRVHIRKRFRLKVPSLGRFL 58

Query: 305 XXKARLVSSMRITCAKVMKRFKDGQVHFGDLFAGNYMFMQVNPTSLKY 448
             + +LVS++R++CAKV+KR K+GQ HFGDLFAGNY+FMQVNPT LKY
Sbjct: 59  RRRVKLVSAVRLSCAKVLKRLKEGQAHFGDLFAGNYLFMQVNPTPLKY 106


>ref|XP_002526973.1| conserved hypothetical protein [Ricinus communis]
           gi|223533725|gb|EEF35460.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 45/111 (40%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
 Frame = +2

Query: 125 MASLSKFRYQRLRNE--VGFDDERYRVIQRPTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 298
           M S +KF YQRL NE  +G  +   R + R +                            
Sbjct: 1   MGSAAKFSYQRLNNEDILGDCEGTERQVARSSRSWQRYRRVHPRKRFRLKVPSLMRRFLR 60

Query: 299 XXXXKARLVSSMRITCAKVMKRFKDGQVHFGDLFAGNYMFMQVNPTSLKYL 451
                 R V+ +    AKV+KR KDGQ HFGDLFAGNY+F+QVNPTSLKYL
Sbjct: 61  ------RKVNLVYAAYAKVLKRLKDGQAHFGDLFAGNYLFLQVNPTSLKYL 105


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