BLASTX nr result

ID: Glycyrrhiza24_contig00028487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028487
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33630.1| unknown [Lotus japonicus]                              191   5e-47
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ...   180   1e-43
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...   175   3e-42
ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi...   153   1e-35
emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]   153   1e-35

>gb|AFK33630.1| unknown [Lotus japonicus]
          Length = 356

 Score =  191 bits (485), Expect = 5e-47
 Identities = 98/122 (80%), Positives = 108/122 (88%)
 Frame = +1

Query: 1   FTFSSVLKACGMMQLDHGRWCGEQVHADAIKLGLVSDNYVQCSLIAMYGRSGLLREAKQV 180
           +TFSSVLKACG M +DHGR CGEQVHADA+KLGL SDNYVQCSLIAMYGRSGLLR+AKQV
Sbjct: 235 YTFSSVLKACGKM-MDHGR-CGEQVHADAMKLGLASDNYVQCSLIAMYGRSGLLRDAKQV 292

Query: 181 FEFEMMTPNGRKVDSWNAMLMGYIRNGLYIEAVKFLYHMKAAGVQPHESLLEKVRIACGS 360
           FE    + + R VDSWNAMLMGY+ NGLYIEAVKFLY MKAAG++PHESLL+KVRIACGS
Sbjct: 293 FE---TSRSERNVDSWNAMLMGYLENGLYIEAVKFLYQMKAAGLKPHESLLDKVRIACGS 349

Query: 361 FT 366
            T
Sbjct: 350 VT 351


>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513792|gb|AES95415.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score =  180 bits (456), Expect = 1e-43
 Identities = 97/120 (80%), Positives = 104/120 (86%)
 Frame = +1

Query: 1   FTFSSVLKACGMMQLDHGRWCGEQVHADAIKLGLVSDNYVQCSLIAMYGRSGLLREAKQV 180
           FTFSSVLKACG MQ + G  CGEQVHADAIKLGL SD+YVQCSLIAMYGRSGLLR+A+ V
Sbjct: 297 FTFSSVLKACGRMQ-NRGS-CGEQVHADAIKLGLDSDSYVQCSLIAMYGRSGLLRDAELV 354

Query: 181 FEFEMMTPNGRKVDSWNAMLMGYIRNGLYIEAVKFLYHMKAAGVQPHESLLEKVRIACGS 360
           FE   MT N R VDS NAMLMGYI+NGLYIEAVKF+Y MKAAGVQPHE LLEK+RIACGS
Sbjct: 355 FE---MTRNERNVDSLNAMLMGYIQNGLYIEAVKFVYQMKAAGVQPHEPLLEKLRIACGS 411


>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max]
          Length = 423

 Score =  175 bits (444), Expect = 3e-42
 Identities = 92/122 (75%), Positives = 104/122 (85%)
 Frame = +1

Query: 1   FTFSSVLKACGMMQLDHGRWCGEQVHADAIKLGLVSDNYVQCSLIAMYGRSGLLREAKQV 180
           FTFSSVLKACG M L+  R CGEQVH DAIKLGLVSD+YVQCSLIAMYGR GLL +AK+V
Sbjct: 302 FTFSSVLKACGRM-LNQER-CGEQVHVDAIKLGLVSDHYVQCSLIAMYGRCGLLEDAKRV 359

Query: 181 FEFEMMTPNGRKVDSWNAMLMGYIRNGLYIEAVKFLYHMKAAGVQPHESLLEKVRIACGS 360
           FE   M+   RKVD WNAMLMGYI+NGLYIEAVKFLY M+AAG+QP ESLL+K+R+ACGS
Sbjct: 360 FE---MSQEERKVDCWNAMLMGYIQNGLYIEAVKFLYQMQAAGMQPRESLLKKLRMACGS 416

Query: 361 FT 366
            +
Sbjct: 417 IS 418


>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Vitis vinifera]
          Length = 414

 Score =  153 bits (387), Expect = 1e-35
 Identities = 80/122 (65%), Positives = 94/122 (77%)
 Frame = +1

Query: 1   FTFSSVLKACGMMQLDHGRWCGEQVHADAIKLGLVSDNYVQCSLIAMYGRSGLLREAKQV 180
           FT+SSVL+ACG M+ DHGR CG  +HA  IKLGL SD YVQC L+ MYG+ GLL EA++V
Sbjct: 286 FTYSSVLRACGRMK-DHGR-CGRLIHASTIKLGLESDIYVQCGLVDMYGKCGLLVEARRV 343

Query: 181 FEFEMMTPNGRKVDSWNAMLMGYIRNGLYIEAVKFLYHMKAAGVQPHESLLEKVRIACGS 360
           FE    T N   +  WNAML GYIR+GLYIEA+KFLY MKAAG+QP ESLL ++RIACGS
Sbjct: 344 FETVSDT-NKTNIVCWNAMLTGYIRHGLYIEAIKFLYQMKAAGIQPQESLLNELRIACGS 402

Query: 361 FT 366
            T
Sbjct: 403 TT 404


>emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]
          Length = 543

 Score =  153 bits (387), Expect = 1e-35
 Identities = 80/122 (65%), Positives = 94/122 (77%)
 Frame = +1

Query: 1   FTFSSVLKACGMMQLDHGRWCGEQVHADAIKLGLVSDNYVQCSLIAMYGRSGLLREAKQV 180
           FT+SSVL+ACG M+ DHGR CG  +HA  IKLGL SD YVQC L+ MYG+ GLL EA++V
Sbjct: 415 FTYSSVLRACGRMK-DHGR-CGRLIHASTIKLGLESDIYVQCGLVDMYGKCGLLVEARRV 472

Query: 181 FEFEMMTPNGRKVDSWNAMLMGYIRNGLYIEAVKFLYHMKAAGVQPHESLLEKVRIACGS 360
           FE    T N   +  WNAML GYIR+GLYIEA+KFLY MKAAG+QP ESLL ++RIACGS
Sbjct: 473 FETVSDT-NKTNIVCWNAMLTGYIRHGLYIEAIKFLYQMKAAGIQPQESLLNELRIACGS 531

Query: 361 FT 366
            T
Sbjct: 532 TT 533


Top