BLASTX nr result

ID: Glycyrrhiza24_contig00028470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028470
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]   152   3e-35
emb|CBI28334.3| unnamed protein product [Vitis vinifera]              130   1e-28
gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indi...    93   3e-17
ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group] g...    93   3e-17

>ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 616

 Score =  152 bits (384), Expect = 3e-35
 Identities = 76/103 (73%), Positives = 82/103 (79%)
 Frame = -2

Query: 311 TSMISAFVLNHRPGKGLGLFREMLSSGVRPDAPAIVSVLSAIADLGFVEEGKWLHTYVLN 132
           TSMISA+V N  P K L LFREMLS G+RPD PAIVSVLSAIADLGFVEEGKWLH YV  
Sbjct: 210 TSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSM 269

Query: 131 NKIHHGGSFIGPALINMYAKCGQIENAYSVFRNICRRRNVGDW 3
           NKI     FIG ALI+MY+KCG IENAY VFR+I  RRN+GDW
Sbjct: 270 NKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDW 312


>emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
          Length = 1033

 Score =  152 bits (384), Expect = 3e-35
 Identities = 76/103 (73%), Positives = 82/103 (79%)
 Frame = -2

Query: 311 TSMISAFVLNHRPGKGLGLFREMLSSGVRPDAPAIVSVLSAIADLGFVEEGKWLHTYVLN 132
           TSMISA+V N  P K L LFREMLS G+RPD PAIVSVLSAIADLGFVEEGKWLH YV  
Sbjct: 241 TSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSM 300

Query: 131 NKIHHGGSFIGPALINMYAKCGQIENAYSVFRNICRRRNVGDW 3
           NKI     FIG ALI+MY+KCG IENAY VFR+I  RRN+GDW
Sbjct: 301 NKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDW 343


>emb|CBI28334.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  130 bits (327), Expect = 1e-28
 Identities = 63/86 (73%), Positives = 69/86 (80%)
 Frame = -2

Query: 260 GLFREMLSSGVRPDAPAIVSVLSAIADLGFVEEGKWLHTYVLNNKIHHGGSFIGPALINM 81
           G  +EMLS G+RPD PAIVSVLSAIADLGFVEEGKWLH YV  NKI     FIG ALI+M
Sbjct: 215 GYGKEMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDM 274

Query: 80  YAKCGQIENAYSVFRNICRRRNVGDW 3
           Y+KCG IENAY VFR+I  RRN+GDW
Sbjct: 275 YSKCGYIENAYHVFRSISHRRNIGDW 300


>gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
          Length = 635

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/93 (49%), Positives = 62/93 (66%)
 Frame = -2

Query: 308 SMISAFVLNHRPGKGLGLFREMLSSGVRPDAPAIVSVLSAIADLGFVEEGKWLHTYVLNN 129
           +MI  +  + RP + L LFR ML SGV PD  AI+  LSA+A LG  E G+WLH+YV N+
Sbjct: 232 AMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNS 291

Query: 128 KIHHGGSFIGPALINMYAKCGQIENAYSVFRNI 30
           +     + +G ALI+MY KCG +E+A SVF +I
Sbjct: 292 RRVQLNARVGTALIDMYCKCGSLEDAVSVFNSI 324


>ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
           gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|24414055|dbj|BAC22304.1| pentatricopeptide
           (PPR) repeat-containing protein-like [Oryza sativa
           Japonica Group] gi|113610284|dbj|BAF20662.1|
           Os07g0113500 [Oryza sativa Japonica Group]
           gi|125598898|gb|EAZ38474.1| hypothetical protein
           OsJ_22862 [Oryza sativa Japonica Group]
          Length = 634

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/93 (49%), Positives = 62/93 (66%)
 Frame = -2

Query: 308 SMISAFVLNHRPGKGLGLFREMLSSGVRPDAPAIVSVLSAIADLGFVEEGKWLHTYVLNN 129
           +MI  +  + RP + L LFR ML SGV PD  AI+  LSA+A LG  E G+WLH+YV N+
Sbjct: 231 AMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNS 290

Query: 128 KIHHGGSFIGPALINMYAKCGQIENAYSVFRNI 30
           +     + +G ALI+MY KCG +E+A SVF +I
Sbjct: 291 RRVQLNARVGTALIDMYCKCGSLEDAVSVFNSI 323


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