BLASTX nr result

ID: Glycyrrhiza24_contig00028451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028451
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534431.1| PREDICTED: TATA-binding protein-associated f...   241   4e-62
ref|XP_003534430.1| PREDICTED: TATA-binding protein-associated f...   241   4e-62
ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated f...   239   2e-61
ref|XP_003605629.1| TATA-binding protein-associated factor [Medi...   238   5e-61
ref|NP_001190085.1| TATA box binding protein associated factor-l...   232   3e-59

>ref|XP_003534431.1| PREDICTED: TATA-binding protein-associated factor 172-like isoform 2
            [Glycine max]
          Length = 2064

 Score =  241 bits (615), Expect = 4e-62
 Identities = 125/145 (86%), Positives = 127/145 (87%)
 Frame = +2

Query: 2    RDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVXXXXXXXXXXXXXXXSADTL 181
            RDLFQTHMK+VTYLRLDGSVEP KRFEIVKAFNSDPTIDV               SADTL
Sbjct: 1864 RDLFQTHMKSVTYLRLDGSVEPGKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTL 1923

Query: 182  VFVEHDWNPMRDLQAMDRAHRLGQKNVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINA 361
            VFVEHDWNPMRDLQAMDRAHRLGQK VVNVHRLIMRGTLEEKVMSLQRFKVSVANAVIN+
Sbjct: 1924 VFVEHDWNPMRDLQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINS 1983

Query: 362  ENASMKTMNTDQLLDLFASAEISKK 436
            ENASMKTMNTDQLLDLFASAE SKK
Sbjct: 1984 ENASMKTMNTDQLLDLFASAETSKK 2008


>ref|XP_003534430.1| PREDICTED: TATA-binding protein-associated factor 172-like isoform 1
            [Glycine max]
          Length = 2047

 Score =  241 bits (615), Expect = 4e-62
 Identities = 125/145 (86%), Positives = 127/145 (87%)
 Frame = +2

Query: 2    RDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVXXXXXXXXXXXXXXXSADTL 181
            RDLFQTHMK+VTYLRLDGSVEP KRFEIVKAFNSDPTIDV               SADTL
Sbjct: 1847 RDLFQTHMKSVTYLRLDGSVEPGKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTL 1906

Query: 182  VFVEHDWNPMRDLQAMDRAHRLGQKNVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINA 361
            VFVEHDWNPMRDLQAMDRAHRLGQK VVNVHRLIMRGTLEEKVMSLQRFKVSVANAVIN+
Sbjct: 1907 VFVEHDWNPMRDLQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINS 1966

Query: 362  ENASMKTMNTDQLLDLFASAEISKK 436
            ENASMKTMNTDQLLDLFASAE SKK
Sbjct: 1967 ENASMKTMNTDQLLDLFASAETSKK 1991


>ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated factor 172-like [Glycine
            max]
          Length = 2047

 Score =  239 bits (610), Expect = 2e-61
 Identities = 124/145 (85%), Positives = 126/145 (86%)
 Frame = +2

Query: 2    RDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVXXXXXXXXXXXXXXXSADTL 181
            RDLF THMK+VTYLRLDGSVEPEKRFEIVKAFNSDPTIDV               SADTL
Sbjct: 1847 RDLFHTHMKSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTL 1906

Query: 182  VFVEHDWNPMRDLQAMDRAHRLGQKNVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINA 361
            VFVEHDWNPMRD QAMDRAHRLGQK VVNVHRLIMRGTLEEKVMSLQRFKVSVANAVIN+
Sbjct: 1907 VFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINS 1966

Query: 362  ENASMKTMNTDQLLDLFASAEISKK 436
            ENASMKTMNTDQLLDLFASAE SKK
Sbjct: 1967 ENASMKTMNTDQLLDLFASAETSKK 1991


>ref|XP_003605629.1| TATA-binding protein-associated factor [Medicago truncatula]
            gi|355506684|gb|AES87826.1| TATA-binding
            protein-associated factor [Medicago truncatula]
          Length = 1477

 Score =  238 bits (606), Expect = 5e-61
 Identities = 123/144 (85%), Positives = 126/144 (87%)
 Frame = +2

Query: 2    RDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVXXXXXXXXXXXXXXXSADTL 181
            +DLFQTHMK+VTYLRLDGSVE EKRFEIVKAFNSDPTIDV               SADTL
Sbjct: 1278 KDLFQTHMKSVTYLRLDGSVETEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTL 1337

Query: 182  VFVEHDWNPMRDLQAMDRAHRLGQKNVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINA 361
            VFVEHDWNPMRDLQAMDRAHRLGQK VVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINA
Sbjct: 1338 VFVEHDWNPMRDLQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINA 1397

Query: 362  ENASMKTMNTDQLLDLFASAEISK 433
            ENAS+KTMNTDQLLDLFASAEI K
Sbjct: 1398 ENASLKTMNTDQLLDLFASAEIPK 1421


>ref|NP_001190085.1| TATA box binding protein associated factor-like protein [Arabidopsis
            thaliana] gi|332645687|gb|AEE79208.1| TATA box binding
            protein associated factor-like protein [Arabidopsis
            thaliana]
          Length = 2129

 Score =  232 bits (591), Expect = 3e-59
 Identities = 119/145 (82%), Positives = 124/145 (85%)
 Frame = +2

Query: 2    RDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVXXXXXXXXXXXXXXXSADTL 181
            +DLFQ HMK+VTY+RLDGSV PEKRFEIVKAFNSDPTIDV               SADTL
Sbjct: 1879 KDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTL 1938

Query: 182  VFVEHDWNPMRDLQAMDRAHRLGQKNVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINA 361
            VF+EHDWNPMRD QAMDRAHRLGQK VVNVHRLIMRGTLEEKVMSLQ+FKVSVAN VINA
Sbjct: 1939 VFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINA 1998

Query: 362  ENASMKTMNTDQLLDLFASAEISKK 436
            ENASMKTMNTDQLLDLFASAE SKK
Sbjct: 1999 ENASMKTMNTDQLLDLFASAETSKK 2023


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