BLASTX nr result

ID: Glycyrrhiza24_contig00028444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028444
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi...    76   3e-12
gb|AFK48656.1| unknown [Lotus japonicus]                               71   8e-11

>ref|XP_003604105.1| Histone deacetylase [Medicago truncatula]
           gi|355493153|gb|AES74356.1| Histone deacetylase
           [Medicago truncatula]
          Length = 1775

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 34/74 (45%), Positives = 50/74 (67%)
 Frame = -3

Query: 226 VQSMADNPFADPINRIPSSAPHTFSYSISVKLDDKNFLQWKQQVEGVIRGHKLQSFLLVP 47
           + +   +P      R+ ++A  TF   +S+KLDD N+LQWKQQVEGV+RG K+  F++ P
Sbjct: 447 MSTATSSPTPFDAQRVTAAASKTFKQVVSIKLDDTNYLQWKQQVEGVLRGTKMVKFVISP 506

Query: 46  QIPPRYLTEEDRES 5
           +IPP YLT+  RE+
Sbjct: 507 EIPPVYLTDAAREA 520


>gb|AFK48656.1| unknown [Lotus japonicus]
          Length = 219

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 30/56 (53%), Positives = 42/56 (75%)
 Frame = -3

Query: 178 PSSAPHTFSYSISVKLDDKNFLQWKQQVEGVIRGHKLQSFLLVPQIPPRYLTEEDR 11
           P  +  +  + + +KLDD NFL WKQ VEG++R H+LQSFL  P+IPPR+L+E+DR
Sbjct: 26  PQLSSTSLVHKLILKLDDSNFLSWKQHVEGIVRTHRLQSFLAHPEIPPRWLSEDDR 81


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