BLASTX nr result

ID: Glycyrrhiza24_contig00028432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028432
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535288.1| PREDICTED: probable actin-related protein 2/...   148   4e-34
ref|XP_003590151.1| Actin-related protein 2/3 complex subunit, p...   134   1e-29
emb|CBI23704.3| unnamed protein product [Vitis vinifera]               74   9e-12
ref|XP_002282041.2| PREDICTED: probable actin-related protein 2/...    73   2e-11
ref|XP_002311692.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10

>ref|XP_003535288.1| PREDICTED: probable actin-related protein 2/3 complex subunit
           2-like [Glycine max]
          Length = 368

 Score =  148 bits (374), Expect = 4e-34
 Identities = 74/91 (81%), Positives = 81/91 (89%)
 Frame = -2

Query: 460 MRKRLENLVEVLHQTNSEENEQTKQVKQHQGFRYTKKLVRSSKYNILKQKWGTFGRKIKR 281
           MRKRLE+LVEVLHQTN EENEQTKQ   HQ +RYTKKLVRS+KY +LKQ+WGTFGRKIKR
Sbjct: 277 MRKRLESLVEVLHQTNLEENEQTKQ---HQVYRYTKKLVRSAKYAVLKQRWGTFGRKIKR 333

Query: 280 IHFRLKIHGFTRFRQRWLRFPKFSSTEYTKL 188
           I FRLKIHGFTRFRQ+W RFPKF ST YTK+
Sbjct: 334 IRFRLKIHGFTRFRQQWFRFPKF-STGYTKI 363


>ref|XP_003590151.1| Actin-related protein 2/3 complex subunit, partial [Medicago
           truncatula] gi|355479199|gb|AES60402.1| Actin-related
           protein 2/3 complex subunit, partial [Medicago
           truncatula]
          Length = 191

 Score =  134 bits (336), Expect = 1e-29
 Identities = 74/93 (79%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
 Frame = -2

Query: 460 MRKRLENLVEVLHQTNSEENEQTKQVKQ-HQGFRYTKKLVRSSKYNILKQKWGTFGRKIK 284
           MRKRLENLVEVLHQTNSEE EQTKQVKQ HQG R TKKLVRSSK+  +K++W T GRKIK
Sbjct: 102 MRKRLENLVEVLHQTNSEEIEQTKQVKQQHQGRRSTKKLVRSSKHT-MKKRWYTLGRKIK 160

Query: 283 RIHFRLKIHGFTRFRQRWLRFPKFSSTEYTKLE 185
           RI FRLKIHGFTRFRQ W  F K SST+YTKLE
Sbjct: 161 RISFRLKIHGFTRFRQCW--FQKNSSTKYTKLE 191


>emb|CBI23704.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/92 (44%), Positives = 58/92 (63%)
 Frame = -2

Query: 460 MRKRLENLVEVLHQTNSEENEQTKQVKQHQGFRYTKKLVRSSKYNILKQKWGTFGRKIKR 281
           M+ RLE+LVEVL   + EE E  ++V   +G R  +KLV  S+  +L ++        K+
Sbjct: 278 MKNRLESLVEVLQNASMEEEEHIQKV---EGCRCVRKLVSLSRSKVLNRRC----HFTKK 330

Query: 280 IHFRLKIHGFTRFRQRWLRFPKFSSTEYTKLE 185
           I   +KIHGF+RFRQ+WL  PKFS  +YTKL+
Sbjct: 331 IRSPIKIHGFSRFRQQWLTMPKFSLIKYTKLD 362


>ref|XP_002282041.2| PREDICTED: probable actin-related protein 2/3 complex subunit
           2-like [Vitis vinifera]
          Length = 368

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
 Frame = -2

Query: 460 MRKRLENLVEVLHQTNSEENEQTKQVK---QHQGFRYTKKLVRSSKYNILKQKWGTFGRK 290
           M+ RLE+LVEVL   + EE E  ++V+      G R  +KLV  S+  +L ++       
Sbjct: 278 MKNRLESLVEVLQNASMEEEEHIQKVEGKWSDAGCRCVRKLVSLSRSKVLNRRC----HF 333

Query: 289 IKRIHFRLKIHGFTRFRQRWLRFPKFSSTEYTKLE 185
            K+I   +KIHGF+RFRQ+WL  PKFS  +YTKL+
Sbjct: 334 TKKIRSPIKIHGFSRFRQQWLTMPKFSLIKYTKLD 368


>ref|XP_002311692.1| predicted protein [Populus trichocarpa] gi|222851512|gb|EEE89059.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = -2

Query: 406 ENEQTKQVKQHQGFRYTKKLVRSSKYNILKQKWGTFGRKIKRIHFRLKIHGFTRFRQRWL 227
           +    K+++ H   RY  KLV  SK    K++     RKI +IHFR+KIHGF RF +RWL
Sbjct: 275 QRRMQKRLETHAECRYVGKLVGLSKPKNFKRRCRDLTRKIMQIHFRIKIHGFRRFHRRWL 334

Query: 226 RFPKFSS-TEYTKLE 185
             PKFSS   YTKLE
Sbjct: 335 TIPKFSSPLRYTKLE 349


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