BLASTX nr result

ID: Glycyrrhiza24_contig00028426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028426
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608170.1| Glutamate receptor 3.6, partial [Medicago tr...    96   4e-18
ref|XP_003517130.1| PREDICTED: glutamate receptor 3.6-like [Glyc...    87   1e-15
ref|XP_003547880.1| PREDICTED: glutamate receptor 3.6-like [Glyc...    86   3e-15
ref|XP_003537690.1| PREDICTED: glutamate receptor 3.6-like [Glyc...    85   5e-15
ref|XP_003612376.1| Glutamate receptor 3.6 [Medicago truncatula]...    84   2e-14

>ref|XP_003608170.1| Glutamate receptor 3.6, partial [Medicago truncatula]
           gi|355509225|gb|AES90367.1| Glutamate receptor 3.6,
           partial [Medicago truncatula]
          Length = 450

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/65 (80%), Positives = 56/65 (86%), Gaps = 1/65 (1%)
 Frame = -3

Query: 194 MIRIWLVVWMALSNL-FSSTGAGLDNSTTVPAFVNIGVLYSFNTSVGRIVKIAVESAVED 18
           MIR+W VV M L NL FSST AGLDNST VP FVNIGVLYSFNTSVGR+VKIAVE+AV D
Sbjct: 1   MIRVWFVVLMVLYNLMFSSTVAGLDNST-VPPFVNIGVLYSFNTSVGRMVKIAVEAAVAD 59

Query: 17  VNSDP 3
           +NSDP
Sbjct: 60  INSDP 64


>ref|XP_003517130.1| PREDICTED: glutamate receptor 3.6-like [Glycine max]
          Length = 938

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/64 (68%), Positives = 52/64 (81%)
 Frame = -3

Query: 194 MIRIWLVVWMALSNLFSSTGAGLDNSTTVPAFVNIGVLYSFNTSVGRIVKIAVESAVEDV 15
           MI+ WL+V M LSN F S G G+ NST +P FVNIG L+SFNTSVGR +KIA+E+AVEDV
Sbjct: 1   MIKAWLLVLMVLSNGFFSNGDGMHNST-IPDFVNIGALFSFNTSVGRSIKIAIEAAVEDV 59

Query: 14  NSDP 3
           NSDP
Sbjct: 60  NSDP 63


>ref|XP_003547880.1| PREDICTED: glutamate receptor 3.6-like [Glycine max]
          Length = 907

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/64 (70%), Positives = 52/64 (81%)
 Frame = -3

Query: 194 MIRIWLVVWMALSNLFSSTGAGLDNSTTVPAFVNIGVLYSFNTSVGRIVKIAVESAVEDV 15
           MI +WLVV M LS   SSTG   DN T +P+FVNIGVLYSFNTSVGR+VK AV++AV+DV
Sbjct: 1   MIGVWLVVLMVLSKGLSSTGVVPDNFT-IPSFVNIGVLYSFNTSVGRMVKTAVQAAVDDV 59

Query: 14  NSDP 3
           NSDP
Sbjct: 60  NSDP 63


>ref|XP_003537690.1| PREDICTED: glutamate receptor 3.6-like [Glycine max]
          Length = 938

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/64 (65%), Positives = 52/64 (81%)
 Frame = -3

Query: 194 MIRIWLVVWMALSNLFSSTGAGLDNSTTVPAFVNIGVLYSFNTSVGRIVKIAVESAVEDV 15
           MI  WL+V MALSN F S G G+ NST +P FVNIG L+SFNTSVGR +KIA+++A+ED+
Sbjct: 1   MILAWLLVLMALSNGFFSNGDGMHNST-IPDFVNIGALFSFNTSVGRSIKIAIKAAIEDI 59

Query: 14  NSDP 3
           NSDP
Sbjct: 60  NSDP 63


>ref|XP_003612376.1| Glutamate receptor 3.6 [Medicago truncatula]
           gi|355513711|gb|AES95334.1| Glutamate receptor 3.6
           [Medicago truncatula]
          Length = 983

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/67 (62%), Positives = 53/67 (79%)
 Frame = -3

Query: 203 TATMIRIWLVVWMALSNLFSSTGAGLDNSTTVPAFVNIGVLYSFNTSVGRIVKIAVESAV 24
           ++TM+++WL+  M L N FSST AG  NST  P  VNIG L+SFNTSVG+I+KIA+E+AV
Sbjct: 30  SSTMVKVWLLALMILYNGFSSTVAGTHNSTR-PDIVNIGALFSFNTSVGKIIKIALEAAV 88

Query: 23  EDVNSDP 3
            DVNSDP
Sbjct: 89  NDVNSDP 95


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