BLASTX nr result

ID: Glycyrrhiza24_contig00028419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028419
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597656.1| DNA repair protein radA-like protein [Medica...   129   3e-28
ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [...   128   5e-28
ref|XP_003627060.1| DNA repair protein radA-like protein [Medica...   127   1e-27
ref|XP_003546961.1| PREDICTED: DNA repair protein RadA homolog [...   122   4e-26
ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25

>ref|XP_003597656.1| DNA repair protein radA-like protein [Medicago truncatula]
           gi|355486704|gb|AES67907.1| DNA repair protein radA-like
           protein [Medicago truncatula]
          Length = 646

 Score =  129 bits (323), Expect = 3e-28
 Identities = 66/82 (80%), Positives = 68/82 (82%)
 Frame = +3

Query: 3   AICSSCLELPIPKDIAFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGG 182
           AICSS LE PIPK IAFI EIGLSGELR VPRIDKRVHA+AKLGYK CVVPKQA K LG 
Sbjct: 563 AICSSFLEYPIPKGIAFIGEIGLSGELRTVPRIDKRVHALAKLGYKTCVVPKQALKALGT 622

Query: 183 EGLGKTKIVCCKNLKEFINVVF 248
           EGL   K+V CKNLKEFIN VF
Sbjct: 623 EGLENIKVVGCKNLKEFINAVF 644


>ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [Glycine max]
          Length = 560

 Score =  128 bits (321), Expect = 5e-28
 Identities = 61/82 (74%), Positives = 70/82 (85%)
 Frame = +3

Query: 3   AICSSCLELPIPKDIAFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGG 182
           AICSSCLE+PIP DIAFI EIGL GELRMVPR++KRV+ VAKLGY+MC+VPK AEK LG 
Sbjct: 473 AICSSCLEIPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKVAEKALGT 532

Query: 183 EGLGKTKIVCCKNLKEFINVVF 248
           EGL K ++V C+NLKE IN VF
Sbjct: 533 EGLEKMEVVGCRNLKEVINTVF 554


>ref|XP_003627060.1| DNA repair protein radA-like protein [Medicago truncatula]
           gi|355521082|gb|AET01536.1| DNA repair protein radA-like
           protein [Medicago truncatula]
          Length = 643

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/90 (66%), Positives = 72/90 (80%)
 Frame = +3

Query: 3   AICSSCLELPIPKDIAFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGG 182
           AICSSCLELPIP DIAFI EIGL GELRMV R++KRVH VAKLGY+MC++PK AEK LG 
Sbjct: 472 AICSSCLELPIPNDIAFIGEIGLGGELRMVTRMEKRVHTVAKLGYRMCIIPKAAEKVLGT 531

Query: 183 EGLGKTKIVCCKNLKEFINVVFKSSH*KKL 272
           EGL   K+V C+NLK+ IN +F +   +K+
Sbjct: 532 EGLENIKVVGCRNLKDVINTIFPNVMRRKI 561


>ref|XP_003546961.1| PREDICTED: DNA repair protein RadA homolog [Glycine max]
          Length = 585

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/86 (69%), Positives = 69/86 (80%)
 Frame = +3

Query: 3   AICSSCLELPIPKDIAFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGG 182
           AICSS LE PIP+  AFI EIGL GELRMVPRI+KRV+ + KLGY+MCVVPKQAEK L  
Sbjct: 500 AICSSFLEFPIPEGTAFIGEIGLGGELRMVPRIEKRVNTLVKLGYRMCVVPKQAEKLLET 559

Query: 183 EGLGKTKIVCCKNLKEFINVVFKSSH 260
           EGLGK K+V CK+LKE IN VF  ++
Sbjct: 560 EGLGKMKVVGCKDLKEVINAVFSRNN 585


>ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|222847004|gb|EEE84551.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/84 (71%), Positives = 65/84 (77%)
 Frame = +3

Query: 3   AICSSCLELPIPKDIAFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGG 182
           AICSS LE PIP +IAFI EIGL GELR VPR++KRVH VAKLGYKMCV+PK AEK L  
Sbjct: 442 AICSSFLEFPIPNNIAFIGEIGLGGELRAVPRMEKRVHTVAKLGYKMCVIPKSAEKSLAN 501

Query: 183 EGLGKTKIVCCKNLKEFINVVFKS 254
            G    KIV CKNLKE IN VFK+
Sbjct: 502 LGFQGMKIVGCKNLKEVINTVFKA 525


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