BLASTX nr result
ID: Glycyrrhiza24_contig00028419
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00028419 (272 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003597656.1| DNA repair protein radA-like protein [Medica... 129 3e-28 ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [... 128 5e-28 ref|XP_003627060.1| DNA repair protein radA-like protein [Medica... 127 1e-27 ref|XP_003546961.1| PREDICTED: DNA repair protein RadA homolog [... 122 4e-26 ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|2... 119 2e-25 >ref|XP_003597656.1| DNA repair protein radA-like protein [Medicago truncatula] gi|355486704|gb|AES67907.1| DNA repair protein radA-like protein [Medicago truncatula] Length = 646 Score = 129 bits (323), Expect = 3e-28 Identities = 66/82 (80%), Positives = 68/82 (82%) Frame = +3 Query: 3 AICSSCLELPIPKDIAFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGG 182 AICSS LE PIPK IAFI EIGLSGELR VPRIDKRVHA+AKLGYK CVVPKQA K LG Sbjct: 563 AICSSFLEYPIPKGIAFIGEIGLSGELRTVPRIDKRVHALAKLGYKTCVVPKQALKALGT 622 Query: 183 EGLGKTKIVCCKNLKEFINVVF 248 EGL K+V CKNLKEFIN VF Sbjct: 623 EGLENIKVVGCKNLKEFINAVF 644 >ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [Glycine max] Length = 560 Score = 128 bits (321), Expect = 5e-28 Identities = 61/82 (74%), Positives = 70/82 (85%) Frame = +3 Query: 3 AICSSCLELPIPKDIAFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGG 182 AICSSCLE+PIP DIAFI EIGL GELRMVPR++KRV+ VAKLGY+MC+VPK AEK LG Sbjct: 473 AICSSCLEIPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKVAEKALGT 532 Query: 183 EGLGKTKIVCCKNLKEFINVVF 248 EGL K ++V C+NLKE IN VF Sbjct: 533 EGLEKMEVVGCRNLKEVINTVF 554 >ref|XP_003627060.1| DNA repair protein radA-like protein [Medicago truncatula] gi|355521082|gb|AET01536.1| DNA repair protein radA-like protein [Medicago truncatula] Length = 643 Score = 127 bits (318), Expect = 1e-27 Identities = 60/90 (66%), Positives = 72/90 (80%) Frame = +3 Query: 3 AICSSCLELPIPKDIAFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGG 182 AICSSCLELPIP DIAFI EIGL GELRMV R++KRVH VAKLGY+MC++PK AEK LG Sbjct: 472 AICSSCLELPIPNDIAFIGEIGLGGELRMVTRMEKRVHTVAKLGYRMCIIPKAAEKVLGT 531 Query: 183 EGLGKTKIVCCKNLKEFINVVFKSSH*KKL 272 EGL K+V C+NLK+ IN +F + +K+ Sbjct: 532 EGLENIKVVGCRNLKDVINTIFPNVMRRKI 561 >ref|XP_003546961.1| PREDICTED: DNA repair protein RadA homolog [Glycine max] Length = 585 Score = 122 bits (305), Expect = 4e-26 Identities = 60/86 (69%), Positives = 69/86 (80%) Frame = +3 Query: 3 AICSSCLELPIPKDIAFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGG 182 AICSS LE PIP+ AFI EIGL GELRMVPRI+KRV+ + KLGY+MCVVPKQAEK L Sbjct: 500 AICSSFLEFPIPEGTAFIGEIGLGGELRMVPRIEKRVNTLVKLGYRMCVVPKQAEKLLET 559 Query: 183 EGLGKTKIVCCKNLKEFINVVFKSSH 260 EGLGK K+V CK+LKE IN VF ++ Sbjct: 560 EGLGKMKVVGCKDLKEVINAVFSRNN 585 >ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|222847004|gb|EEE84551.1| predicted protein [Populus trichocarpa] Length = 525 Score = 119 bits (299), Expect = 2e-25 Identities = 60/84 (71%), Positives = 65/84 (77%) Frame = +3 Query: 3 AICSSCLELPIPKDIAFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGG 182 AICSS LE PIP +IAFI EIGL GELR VPR++KRVH VAKLGYKMCV+PK AEK L Sbjct: 442 AICSSFLEFPIPNNIAFIGEIGLGGELRAVPRMEKRVHTVAKLGYKMCVIPKSAEKSLAN 501 Query: 183 EGLGKTKIVCCKNLKEFINVVFKS 254 G KIV CKNLKE IN VFK+ Sbjct: 502 LGFQGMKIVGCKNLKEVINTVFKA 525