BLASTX nr result

ID: Glycyrrhiza24_contig00028396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028396
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521882.1| PREDICTED: U-box domain-containing protein 3...    87   1e-15
ref|XP_003529938.1| PREDICTED: U-box domain-containing protein 3...    79   5e-13
gb|AFK41159.1| unknown [Lotus japonicus]                               74   9e-12
ref|XP_003627576.1| U-box domain-containing protein [Medicago tr...    69   5e-10
ref|XP_003552396.1| PREDICTED: U-box domain-containing protein 3...    64   1e-08

>ref|XP_003521882.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max]
          Length = 877

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/68 (67%), Positives = 56/68 (82%)
 Frame = -3

Query: 206 PMPTTPQRVGSSVNSIRDIGINPAIVSTRREIAKEHNPSGVNETIYVAVAKDVKDSKLNL 27
           PMP TP +V + VN +R+ G+ P I+++RREI  E +PS VNETIYVAVAKDVKDSKLNL
Sbjct: 6   PMPATPPQV-NPVNLLRNTGV-PGIMTSRREIVNEPSPSMVNETIYVAVAKDVKDSKLNL 63

Query: 26  IWAIQHSG 3
           IWAIQ+SG
Sbjct: 64  IWAIQNSG 71


>ref|XP_003529938.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max]
          Length = 879

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/67 (61%), Positives = 54/67 (80%)
 Frame = -3

Query: 203 MPTTPQRVGSSVNSIRDIGINPAIVSTRREIAKEHNPSGVNETIYVAVAKDVKDSKLNLI 24
           MP TP +V + VNS+RDIG+ P I+++RR+I  + +PS VN+TIYVAV K+VK SK NLI
Sbjct: 7   MPATPPQV-NPVNSLRDIGV-PGIMTSRRKIVNKPSPSMVNDTIYVAVGKNVKSSKSNLI 64

Query: 23  WAIQHSG 3
           WAIQ+SG
Sbjct: 65  WAIQNSG 71


>gb|AFK41159.1| unknown [Lotus japonicus]
          Length = 110

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = -3

Query: 194 TPQRVGSSVNSIRDIGINPAIVSTRREIAKEHNPSGVNETIYVAVAKDVKDSKLNLIWAI 15
           TPQ + S  NS+ D  + P +++TRREI +E N S VN+TIYVAVAKDVKDS+LNLIWAI
Sbjct: 10  TPQGIISG-NSLGDFRL-PRMLTTRREIIEEPNQSVVNDTIYVAVAKDVKDSRLNLIWAI 67

Query: 14  QHSG 3
           Q+SG
Sbjct: 68  QNSG 71


>ref|XP_003627576.1| U-box domain-containing protein [Medicago truncatula]
           gi|355521598|gb|AET02052.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 76

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = -3

Query: 131 VSTRREIAKEHNPSGVNETIYVAVAKDVKDSKLNLIWAIQHSG 3
           +++RRE  KE NPSGV  TIYVAVAKDVKDSKLN+IWAIQ+SG
Sbjct: 7   MNSRREPVKEVNPSGVKNTIYVAVAKDVKDSKLNVIWAIQNSG 49


>ref|XP_003552396.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max]
          Length = 883

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/68 (52%), Positives = 46/68 (67%)
 Frame = -3

Query: 206 PMPTTPQRVGSSVNSIRDIGINPAIVSTRREIAKEHNPSGVNETIYVAVAKDVKDSKLNL 27
           PMP T QR+GS V S+ D G          +  +E NPS V++ IYVAV K+VK+S+LNL
Sbjct: 6   PMPATTQRMGS-VRSLSDAG---------GKFLEEPNPSVVDQPIYVAVTKEVKESRLNL 55

Query: 26  IWAIQHSG 3
           IWAIQ+SG
Sbjct: 56  IWAIQNSG 63


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