BLASTX nr result

ID: Glycyrrhiza24_contig00028377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028377
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526279.1| PREDICTED: cellulose synthase A catalytic su...   114   1e-33
gb|ACC59194.1| cellulose synthase [Betula platyphylla]                 87   2e-23
ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic su...    89   4e-23
gb|ACJ38664.1| cellulose synthase [Betula luminifera]                  86   5e-23
emb|CBI30712.3| unnamed protein product [Vitis vinifera]               89   2e-22

>ref|XP_003526279.1| PREDICTED: cellulose synthase A catalytic subunit 8
           [UDP-forming]-like [Glycine max]
          Length = 975

 Score =  114 bits (285), Expect(2) = 1e-33
 Identities = 53/68 (77%), Positives = 59/68 (86%)
 Frame = +2

Query: 272 FVACHECYFPICKACVDYEINEGRRVCLRCATPYAAADRTRGNDDTKVPGNQSRMAAQIS 451
           FVACHECYFPICKAC +YEINEGR+VCLRCATPY  ADR + N+DTKV  NQS  AAQI+
Sbjct: 25  FVACHECYFPICKACFEYEINEGRKVCLRCATPY--ADRAKDNNDTKVYENQSTTAAQIN 82

Query: 452 VSEDVGLH 475
           VS+DVGLH
Sbjct: 83  VSQDVGLH 90



 Score = 53.9 bits (128), Expect(2) = 1e-33
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +1

Query: 124 MMESGVQFCNSCGEQMGVDANGEVFVA 204
           MMESG  FCNSCGEQ+G+DANGEVFVA
Sbjct: 1   MMESGAHFCNSCGEQIGLDANGEVFVA 27


>gb|ACC59194.1| cellulose synthase [Betula platyphylla]
          Length = 985

 Score = 87.0 bits (214), Expect(2) = 2e-23
 Identities = 40/68 (58%), Positives = 50/68 (73%)
 Frame = +2

Query: 272 FVACHECYFPICKACVDYEINEGRRVCLRCATPYAAADRTRGNDDTKVPGNQSRMAAQIS 451
           FVACH C F IC+ACVDYEINEGR+ CLRCA PY   D    + + KV  N++ MAAQ++
Sbjct: 25  FVACHHCNFSICRACVDYEINEGRKACLRCAAPY-DDDSVVDDVELKVSDNRTTMAAQLN 83

Query: 452 VSEDVGLH 475
            S+DVG+H
Sbjct: 84  NSQDVGIH 91



 Score = 47.0 bits (110), Expect(2) = 2e-23
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = +1

Query: 124 MMESGVQFCNSCGEQMGVDANGEVFVA 204
           MMES V  CNSCGEQ+GV ANG+VFVA
Sbjct: 1   MMESEVPLCNSCGEQVGVGANGDVFVA 27


>ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming]
           [Vitis vinifera]
          Length = 1360

 Score = 88.6 bits (218), Expect(2) = 4e-23
 Identities = 38/68 (55%), Positives = 51/68 (75%)
 Frame = +2

Query: 272 FVACHECYFPICKACVDYEINEGRRVCLRCATPYAAADRTRGNDDTKVPGNQSRMAAQIS 451
           FVACHEC FP+CK+C+DYEI EGR+VCLRC+TPY  +  T  + +T    N S MAA ++
Sbjct: 402 FVACHECNFPVCKSCLDYEIKEGRKVCLRCSTPYDESS-TMADVETNQSSNHSTMAAHLN 460

Query: 452 VSEDVGLH 475
            ++DVG+H
Sbjct: 461 DAQDVGMH 468



 Score = 44.3 bits (103), Expect(2) = 4e-23
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +1

Query: 121 KMMESGVQFCNSCGEQMGVDANGEVFVA 204
           KMM+SGV  C +CGE +G D+NGEVFVA
Sbjct: 377 KMMQSGVPPCTTCGEPVGFDSNGEVFVA 404


>gb|ACJ38664.1| cellulose synthase [Betula luminifera]
          Length = 985

 Score = 85.5 bits (210), Expect(2) = 5e-23
 Identities = 41/69 (59%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
 Frame = +2

Query: 272 FVACHECYFPICKACVDYEINEGRRVCLRCATPYAAADRTRGND-DTKVPGNQSRMAAQI 448
           FVACH C F ICKACVDYEINEGR+ CLRCA PY   D +  +D + KV  +++ MAAQ+
Sbjct: 25  FVACHHCNFSICKACVDYEINEGRKACLRCAAPY--DDNSVVDDVELKVSDSRTTMAAQL 82

Query: 449 SVSEDVGLH 475
           + S+DVG+H
Sbjct: 83  NNSQDVGIH 91



 Score = 47.0 bits (110), Expect(2) = 5e-23
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = +1

Query: 124 MMESGVQFCNSCGEQMGVDANGEVFVA 204
           MMES V  CNSCGEQ+GV ANG+VFVA
Sbjct: 1   MMESEVPLCNSCGEQVGVGANGDVFVA 27


>emb|CBI30712.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score = 88.6 bits (218), Expect(2) = 2e-22
 Identities = 38/68 (55%), Positives = 51/68 (75%)
 Frame = +2

Query: 272 FVACHECYFPICKACVDYEINEGRRVCLRCATPYAAADRTRGNDDTKVPGNQSRMAAQIS 451
           FVACHEC FP+CK+C+DYEI EGR+VCLRC+TPY  +  T  + +T    N S MAA ++
Sbjct: 25  FVACHECNFPVCKSCLDYEIKEGRKVCLRCSTPYDESS-TMADVETNQSSNHSTMAAHLN 83

Query: 452 VSEDVGLH 475
            ++DVG+H
Sbjct: 84  DAQDVGMH 91



 Score = 42.4 bits (98), Expect(2) = 2e-22
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +1

Query: 124 MMESGVQFCNSCGEQMGVDANGEVFVA 204
           MM+SGV  C +CGE +G D+NGEVFVA
Sbjct: 1   MMQSGVPPCTTCGEPVGFDSNGEVFVA 27


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