BLASTX nr result

ID: Glycyrrhiza24_contig00028372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028372
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592939.1| PHD finger protein 21A [Medicago truncatula]...    91   1e-16
ref|XP_002526722.1| conserved hypothetical protein [Ricinus comm...    86   3e-15
ref|XP_002323310.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002308044.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
emb|CAN80644.1| hypothetical protein VITISV_016915 [Vitis vinifera]    76   2e-12

>ref|XP_003592939.1| PHD finger protein 21A [Medicago truncatula]
           gi|355481987|gb|AES63190.1| PHD finger protein 21A
           [Medicago truncatula]
          Length = 473

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/78 (58%), Positives = 55/78 (70%)
 Frame = +1

Query: 61  SSLDSRVRLDFSRTCEDVLQEILQQVPLSNLKNPGEELFRWDIYPFIMHKRASTVKCHLE 240
           SS  +   LD S + +DVL +IL QV LSNL+  G ELF+WD+  FI HKRA  VKC LE
Sbjct: 65  SSTTTLEELDSSLSSQDVLLQILHQVSLSNLRTSGPELFKWDVNRFIAHKRADNVKCQLE 124

Query: 241 QLKESILEGTQPLTDDLK 294
           +LKESIL+GT PL D LK
Sbjct: 125 KLKESILDGTLPLNDHLK 142


>ref|XP_002526722.1| conserved hypothetical protein [Ricinus communis]
           gi|223533911|gb|EEF35636.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 814

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/75 (52%), Positives = 55/75 (73%)
 Frame = +1

Query: 52  EAYSSLDSRVRLDFSRTCEDVLQEILQQVPLSNLKNPGEELFRWDIYPFIMHKRASTVKC 231
           +A S  + ++  D +  CEDVLQ IL+++ +S+LK  G +L +WD+ PFI+HKRAS  KC
Sbjct: 72  DAPSVPNQKITFDLNEACEDVLQSILKEMSVSDLKMAGPDLLKWDVPPFILHKRASMPKC 131

Query: 232 HLEQLKESILEGTQP 276
            LEQLK++ILEGT P
Sbjct: 132 ALEQLKDAILEGTHP 146


>ref|XP_002323310.1| predicted protein [Populus trichocarpa] gi|222867940|gb|EEF05071.1|
           predicted protein [Populus trichocarpa]
          Length = 827

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/72 (54%), Positives = 52/72 (72%)
 Frame = +1

Query: 61  SSLDSRVRLDFSRTCEDVLQEILQQVPLSNLKNPGEELFRWDIYPFIMHKRASTVKCHLE 240
           +S + +V  D S +CEDVLQ ILQ+  +S+L   G EL +WDI+PFIMHKRA   KC LE
Sbjct: 91  TSKELKVTFDLSESCEDVLQSILQETSVSDLNRGGPELLKWDIHPFIMHKRACMPKCALE 150

Query: 241 QLKESILEGTQP 276
           ++K++ILEG  P
Sbjct: 151 KVKDAILEGIHP 162


>ref|XP_002308044.1| predicted protein [Populus trichocarpa] gi|222854020|gb|EEE91567.1|
           predicted protein [Populus trichocarpa]
          Length = 575

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/71 (52%), Positives = 49/71 (69%)
 Frame = +1

Query: 64  SLDSRVRLDFSRTCEDVLQEILQQVPLSNLKNPGEELFRWDIYPFIMHKRASTVKCHLEQ 243
           S + +V  D S +CEDVLQ ILQ+  +S+LK  G    +WD +PFIMHKRA   KC LE+
Sbjct: 77  SKEPKVTFDLSESCEDVLQSILQETSVSDLKRAGPGRLKWDTHPFIMHKRAFMPKCALEK 136

Query: 244 LKESILEGTQP 276
           +K++ILEG  P
Sbjct: 137 VKDAILEGIHP 147


>emb|CAN80644.1| hypothetical protein VITISV_016915 [Vitis vinifera]
          Length = 774

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/85 (43%), Positives = 55/85 (64%)
 Frame = +1

Query: 40  GVNLEAYSSLDSRVRLDFSRTCEDVLQEILQQVPLSNLKNPGEELFRWDIYPFIMHKRAS 219
           G+  + +  + S++  D S +CEDVLQ IL++V  S L+    EL +W++ PFI HKRA 
Sbjct: 64  GITNDVHPVVHSKMGFDPSESCEDVLQCILRKVSASKLRMGEPELLKWNVNPFIAHKRAC 123

Query: 220 TVKCHLEQLKESILEGTQPLTDDLK 294
             KC L++LK++ILEG+ P    LK
Sbjct: 124 LPKCALQELKDTILEGSHPSAXSLK 148


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