BLASTX nr result

ID: Glycyrrhiza24_contig00028367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028367
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611980.1| Swi2/Snf2-related chromatin remodeling ATPas...   213   1e-53
ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   213   1e-53
dbj|BAG30707.1| decrease in DNA methylation 1 [Brassica rapa]         209   1e-52
ref|XP_003537581.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   209   2e-52
ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-l...   207   9e-52

>ref|XP_003611980.1| Swi2/Snf2-related chromatin remodeling ATPase [Medicago truncatula]
           gi|355513315|gb|AES94938.1| Swi2/Snf2-related chromatin
           remodeling ATPase [Medicago truncatula]
          Length = 750

 Score =  213 bits (543), Expect = 1e-53
 Identities = 101/106 (95%), Positives = 104/106 (98%)
 Frame = +3

Query: 3   VLDIMDYYFSEKGFEVCRIDGSVKLDERKRQIQDFNDPDSNCRVFLLSTRAGGLGINLTA 182
           VLDIMDYYFSEKGFEVCRIDGSVKLD+RKRQIQDFND  SNCR+FLLSTRAGGLGINLTA
Sbjct: 534 VLDIMDYYFSEKGFEVCRIDGSVKLDDRKRQIQDFNDTTSNCRIFLLSTRAGGLGINLTA 593

Query: 183 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSVEGR 320
           ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRL+TAQSVEGR
Sbjct: 594 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGR 639


>ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 943

 Score =  213 bits (542), Expect = 1e-53
 Identities = 101/106 (95%), Positives = 104/106 (98%)
 Frame = +3

Query: 3    VLDIMDYYFSEKGFEVCRIDGSVKLDERKRQIQDFNDPDSNCRVFLLSTRAGGLGINLTA 182
            VLDIMDYYFSEKGFEVCRIDG VKLDERK+QIQDFND +SNCRVFLLSTRAGGLGINLTA
Sbjct: 725  VLDIMDYYFSEKGFEVCRIDGGVKLDERKQQIQDFNDVNSNCRVFLLSTRAGGLGINLTA 784

Query: 183  ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSVEGR 320
            ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQS+EGR
Sbjct: 785  ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIEGR 830


>dbj|BAG30707.1| decrease in DNA methylation 1 [Brassica rapa]
          Length = 767

 Score =  209 bits (533), Expect = 1e-52
 Identities = 97/106 (91%), Positives = 104/106 (98%)
 Frame = +3

Query: 3   VLDIMDYYFSEKGFEVCRIDGSVKLDERKRQIQDFNDPDSNCRVFLLSTRAGGLGINLTA 182
           +LDIMDYYFSEKGFEVCRIDGSVKL+ER+RQIQ+FND  SNCR+FLLSTRAGGLGINLTA
Sbjct: 555 ILDIMDYYFSEKGFEVCRIDGSVKLEERRRQIQEFNDEKSNCRIFLLSTRAGGLGINLTA 614

Query: 183 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSVEGR 320
           ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRL+TAQS+EGR
Sbjct: 615 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSIEGR 660


>ref|XP_003537581.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 757

 Score =  209 bits (532), Expect = 2e-52
 Identities = 99/106 (93%), Positives = 103/106 (97%)
 Frame = +3

Query: 3   VLDIMDYYFSEKGFEVCRIDGSVKLDERKRQIQDFNDPDSNCRVFLLSTRAGGLGINLTA 182
           VLDIMDYYFSEKGF VCRIDGSVKL+ERK+QIQDFND +SNCRVFLLSTRAGGLGINLT 
Sbjct: 539 VLDIMDYYFSEKGFAVCRIDGSVKLEERKQQIQDFNDVNSNCRVFLLSTRAGGLGINLTV 598

Query: 183 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSVEGR 320
           ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQS+EGR
Sbjct: 599 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIEGR 644


>ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-like [Vitis vinifera]
          Length = 759

 Score =  207 bits (526), Expect = 9e-52
 Identities = 96/106 (90%), Positives = 104/106 (98%)
 Frame = +3

Query: 3   VLDIMDYYFSEKGFEVCRIDGSVKLDERKRQIQDFNDPDSNCRVFLLSTRAGGLGINLTA 182
           +LDIM+YYFSEKG EVCRIDGSV+LDERKRQI++FND +SNCRVFLLSTRAGGLGINLTA
Sbjct: 541 ILDIMEYYFSEKGLEVCRIDGSVRLDERKRQIEEFNDMNSNCRVFLLSTRAGGLGINLTA 600

Query: 183 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSVEGR 320
           ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRL+TAQS+EGR
Sbjct: 601 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSIEGR 646


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