BLASTX nr result

ID: Glycyrrhiza24_contig00028362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028362
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545606.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-...    84   1e-14
ref|XP_003545605.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-...    84   1e-14
ref|XP_003519442.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-...    77   1e-12
ref|XP_003637493.1| E3 ubiquitin-protein ligase BRE1-like protei...    74   9e-12
emb|CBI16487.3| unnamed protein product [Vitis vinifera]               60   1e-07

>ref|XP_003545606.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like isoform 2
           [Glycine max]
          Length = 898

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 47/82 (57%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
 Frame = +2

Query: 8   MENSDHNEPDKKRPHLTSVXXXXXXXXXXXXX--KTADAGXXXXXXXXXXXXTDIQKHAL 181
           MENSDH+EP+KKRPHLTSV               KTADAG             DIQKHAL
Sbjct: 1   MENSDHDEPEKKRPHLTSVSSRTPRNSINSPTNNKTADAGVLQFQNQQLVQQIDIQKHAL 60

Query: 182 QELEEKIRELKDRQYSYDDLLI 247
            +LEEKIRELK +Q SYDDLLI
Sbjct: 61  HDLEEKIRELKGKQSSYDDLLI 82


>ref|XP_003545605.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like isoform 1
           [Glycine max]
          Length = 879

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 47/82 (57%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
 Frame = +2

Query: 8   MENSDHNEPDKKRPHLTSVXXXXXXXXXXXXX--KTADAGXXXXXXXXXXXXTDIQKHAL 181
           MENSDH+EP+KKRPHLTSV               KTADAG             DIQKHAL
Sbjct: 1   MENSDHDEPEKKRPHLTSVSSRTPRNSINSPTNNKTADAGVLQFQNQQLVQQIDIQKHAL 60

Query: 182 QELEEKIRELKDRQYSYDDLLI 247
            +LEEKIRELK +Q SYDDLLI
Sbjct: 61  HDLEEKIRELKGKQSSYDDLLI 82


>ref|XP_003519442.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like [Glycine
           max]
          Length = 881

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/82 (53%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = +2

Query: 8   MENSDHNEPDKKRPHLTSVXXXXXXXXXXXXX--KTADAGXXXXXXXXXXXXTDIQKHAL 181
           MENSD++EP+KKRPHLT V               KTAD G             DIQKHAL
Sbjct: 1   MENSDNDEPEKKRPHLTFVSSRTPRNSINTPATNKTADPGVLQFQNQQLVQQIDIQKHAL 60

Query: 182 QELEEKIRELKDRQYSYDDLLI 247
            +LEEKIRELK +Q SYDDLLI
Sbjct: 61  HDLEEKIRELKGKQSSYDDLLI 82


>ref|XP_003637493.1| E3 ubiquitin-protein ligase BRE1-like protein [Medicago truncatula]
           gi|355503428|gb|AES84631.1| E3 ubiquitin-protein ligase
           BRE1-like protein [Medicago truncatula]
          Length = 883

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/83 (49%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
 Frame = +2

Query: 8   MENSDHNEPDKKRPHL---TSVXXXXXXXXXXXXXKTADAGXXXXXXXXXXXXTDIQKHA 178
           MENSDH+EP+ K+PHL    S              K ADAG            T+ QKHA
Sbjct: 1   MENSDHDEPNNKKPHLLTPVSSRVSPNSTNHSPNGKNADAGLLQLQNQQLVQQTETQKHA 60

Query: 179 LQELEEKIRELKDRQYSYDDLLI 247
           LQ+LEEK RELK+RQ SYDD+LI
Sbjct: 61  LQDLEEKTRELKERQNSYDDILI 83


>emb|CBI16487.3| unnamed protein product [Vitis vinifera]
          Length = 879

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
 Frame = +2

Query: 8   MENSDHNE-PDKKRPHLTSVXXXXXXXXXXXXX-KTADAGXXXXXXXXXXXXTDIQKHAL 181
           MEN+D +E P+KKRPHL ++              ++ DA              ++QKH L
Sbjct: 1   MENADSSEEPEKKRPHLNTLSSPMARNSSVSPDNRSVDATYLQYQNQKLVQQLEVQKHEL 60

Query: 182 QELEEKIRELKDRQYSYDDLLI 247
            +LE+KI+ELKDRQ SYDD+LI
Sbjct: 61  HDLEDKIKELKDRQTSYDDMLI 82


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