BLASTX nr result

ID: Glycyrrhiza24_contig00028361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028361
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637493.1| E3 ubiquitin-protein ligase BRE1-like protei...   177   8e-43
ref|XP_003519442.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-...   172   3e-41
ref|XP_003545606.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-...   169   3e-40
ref|XP_003545605.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-...   169   3e-40
ref|XP_002283417.2| PREDICTED: E3 ubiquitin-protein ligase BRE1-...   144   7e-33

>ref|XP_003637493.1| E3 ubiquitin-protein ligase BRE1-like protein [Medicago truncatula]
           gi|355503428|gb|AES84631.1| E3 ubiquitin-protein ligase
           BRE1-like protein [Medicago truncatula]
          Length = 883

 Score =  177 bits (449), Expect = 8e-43
 Identities = 90/116 (77%), Positives = 99/116 (85%)
 Frame = -3

Query: 351 YDDLLIAWNQHWIQLVDDIILLGVQAGRGKDSLQSLANLDNPQGSLPSCPPEDLFLCRLI 172
           YDD+LIA NQ W QLVDD+  LG+QAGRGKDSL++L  LDN QGSLPSC P+DL LCRLI
Sbjct: 78  YDDILIAINQRWDQLVDDMAFLGIQAGRGKDSLETLDYLDNLQGSLPSCHPDDLLLCRLI 137

Query: 171 QKDSIEGSSNDEMINYVEEALALRGSSTRELLKLLQDTVDGQMERIGNIAQVLHGD 4
           QKDSIEGSSNDE+ NYVEEALALR  STRELLKL+QDTVD QMERI +I QVL GD
Sbjct: 138 QKDSIEGSSNDEITNYVEEALALRRLSTRELLKLIQDTVDDQMERIEDIGQVLQGD 193


>ref|XP_003519442.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like [Glycine
           max]
          Length = 881

 Score =  172 bits (436), Expect = 3e-41
 Identities = 88/118 (74%), Positives = 103/118 (87%), Gaps = 2/118 (1%)
 Frame = -3

Query: 351 YDDLLIAWNQHWIQLVDDIILLGVQAGRGK--DSLQSLANLDNPQGSLPSCPPEDLFLCR 178
           YDDLLIA NQ W QLVDD+ILLG++AGRGK  D+LQ L ++DNPQGSLP CP ED+FLCR
Sbjct: 77  YDDLLIALNQLWTQLVDDMILLGIRAGRGKGKDTLQHLTDIDNPQGSLPLCPAEDIFLCR 136

Query: 177 LIQKDSIEGSSNDEMINYVEEALALRGSSTRELLKLLQDTVDGQMERIGNIAQVLHGD 4
           LIQKDSI+G S+DE+I+ V+EALALR SSTRELLKLL+DT+D QMER G+IAQVLH D
Sbjct: 137 LIQKDSIKGISDDEIISCVKEALALRQSSTRELLKLLKDTIDYQMERAGSIAQVLHED 194


>ref|XP_003545606.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like isoform 2
           [Glycine max]
          Length = 898

 Score =  169 bits (427), Expect = 3e-40
 Identities = 87/118 (73%), Positives = 102/118 (86%), Gaps = 2/118 (1%)
 Frame = -3

Query: 351 YDDLLIAWNQHWIQLVDDIILLGVQAGRGK--DSLQSLANLDNPQGSLPSCPPEDLFLCR 178
           YDDLLIA NQ W QLVDD+ILLG++AGRGK  D+LQ L ++DNPQ  +P CP ED+FLCR
Sbjct: 77  YDDLLIALNQLWTQLVDDMILLGIRAGRGKGKDTLQHLTDIDNPQ--VPLCPAEDMFLCR 134

Query: 177 LIQKDSIEGSSNDEMINYVEEALALRGSSTRELLKLLQDTVDGQMERIGNIAQVLHGD 4
           LIQKDSI+G S+DE+I+YVEEALALR S TRELLKLL+DT+D QMER G+IAQVLHGD
Sbjct: 135 LIQKDSIKGISDDEIISYVEEALALRQSYTRELLKLLKDTIDDQMERAGSIAQVLHGD 192


>ref|XP_003545605.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like isoform 1
           [Glycine max]
          Length = 879

 Score =  169 bits (427), Expect = 3e-40
 Identities = 87/118 (73%), Positives = 102/118 (86%), Gaps = 2/118 (1%)
 Frame = -3

Query: 351 YDDLLIAWNQHWIQLVDDIILLGVQAGRGK--DSLQSLANLDNPQGSLPSCPPEDLFLCR 178
           YDDLLIA NQ W QLVDD+ILLG++AGRGK  D+LQ L ++DNPQ  +P CP ED+FLCR
Sbjct: 77  YDDLLIALNQLWTQLVDDMILLGIRAGRGKGKDTLQHLTDIDNPQ--VPLCPAEDMFLCR 134

Query: 177 LIQKDSIEGSSNDEMINYVEEALALRGSSTRELLKLLQDTVDGQMERIGNIAQVLHGD 4
           LIQKDSI+G S+DE+I+YVEEALALR S TRELLKLL+DT+D QMER G+IAQVLHGD
Sbjct: 135 LIQKDSIKGISDDEIISYVEEALALRQSYTRELLKLLKDTIDDQMERAGSIAQVLHGD 192


>ref|XP_002283417.2| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like [Vitis
           vinifera]
          Length = 872

 Score =  144 bits (363), Expect = 7e-33
 Identities = 67/115 (58%), Positives = 91/115 (79%)
 Frame = -3

Query: 351 YDDLLIAWNQHWIQLVDDIILLGVQAGRGKDSLQSLANLDNPQGSLPSCPPEDLFLCRLI 172
           YDD+LI  NQ W QLVDD+ILLGV+AG G++++Q+L + D+ +G +PSCP E++FLCRL+
Sbjct: 70  YDDMLITMNQLWSQLVDDLILLGVRAGGGQNAIQTLDHADHSRGLIPSCPAEEIFLCRLL 129

Query: 171 QKDSIEGSSNDEMINYVEEALALRGSSTRELLKLLQDTVDGQMERIGNIAQVLHG 7
           + DS+E + ND ++ YVEEALALR SST EL+K L+DT+D Q  +  NIAQ LHG
Sbjct: 130 ETDSVESNGNDGIVKYVEEALALRHSSTLELIKSLEDTIDAQRVKTENIAQALHG 184


Top