BLASTX nr result

ID: Glycyrrhiza24_contig00028345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028345
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44270.1| unknown [Medicago truncatula]                           96   4e-18
gb|AFK36511.1| unknown [Medicago truncatula]                           79   5e-13
ref|XP_002530814.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_002539784.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_002530813.1| conserved hypothetical protein [Ricinus comm...    73   3e-11

>gb|AFK44270.1| unknown [Medicago truncatula]
          Length = 98

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 59/87 (67%), Positives = 67/87 (77%)
 Frame = +3

Query: 120 MDVAAGDAGFRNATSSPVPYLFGGLSLMLVLMAFALTILACSSHRNSSLSTSDGNNNNEE 299
           MDVAAG  GF+N TS P PYLFGGL+LML ++AFAL ILAC+   N SLST+ G    EE
Sbjct: 1   MDVAAG-GGFKNVTS-PTPYLFGGLALMLAIIAFALIILACTCQEN-SLSTNAG--GYEE 55

Query: 300 KSTKNVEMDEVDNLEPKIVVIMAGDSN 380
           K TKNVEM  V +LEPKIVVIMAGD+N
Sbjct: 56  KDTKNVEM--VVDLEPKIVVIMAGDTN 80


>gb|AFK36511.1| unknown [Medicago truncatula]
          Length = 113

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 48/101 (47%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
 Frame = +3

Query: 90  LSPSS--ARNSTMDVAAGDAGFRNATSSPVPYLFGGLSLMLVLMAFALTILACSSHRNSS 263
           + P+S  + NSTM+ ++ +       SSP+PYLFGG++L+L ++A AL I+A S  +  S
Sbjct: 1   MGPNSTLSNNSTMNKSSSETASLRNLSSPIPYLFGGIALVLGVIAIALLIIAYSFRKQYS 60

Query: 264 LSTSDGNNNNEEKSTKN--VEMDEVDNLEPKIVVIMAGDSN 380
            STS    N+EEKS+    V+MD+V +LEPKIVV+MAG+SN
Sbjct: 61  SSTS---TNDEEKSSNMHVVDMDQV-SLEPKIVVVMAGESN 97


>ref|XP_002530814.1| conserved hypothetical protein [Ricinus communis]
           gi|223529635|gb|EEF31582.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 115

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 42/73 (57%), Positives = 52/73 (71%)
 Frame = +3

Query: 162 SSPVPYLFGGLSLMLVLMAFALTILACSSHRNSSLSTSDGNNNNEEKSTKNVEMDEVDNL 341
           SSP+PYLFGGL+LML ++A AL ILAC S+R S    S G+ + E+   K  E+  VD+ 
Sbjct: 17  SSPMPYLFGGLALMLGVIAVALIILAC-SYRKSLSDESRGDGHEEKPGAKQAEL-TVDSD 74

Query: 342 EPKIVVIMAGDSN 380
           EPKIVVIMAGD N
Sbjct: 75  EPKIVVIMAGDDN 87


>ref|XP_002539784.1| conserved hypothetical protein [Ricinus communis]
           gi|223502421|gb|EEF22599.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
 Frame = +3

Query: 90  LSPSSARNSTMDVAAGDAGFRNATSSPVPYLFGGLSLMLVLMAFALTILACSSHRNSSLS 269
           + P++  NST   AAG   +    SSP+PYLFGGL++ML  +  +L ILAC S+R S  +
Sbjct: 2   MRPTATSNSTTAAAAGFWHW----SSPIPYLFGGLAVMLAFVTVSLIILAC-SYRKSLFN 56

Query: 270 TSDGNNNNEEKS-TKNVEMDEVDNLEPKIVVIMAGDSN 380
               ++++E+K+  K VE+  VD+ EPKIVVIMAGD+N
Sbjct: 57  HESRDDDHEDKTGAKKVEV-MVDSDEPKIVVIMAGDNN 93


>ref|XP_002530813.1| conserved hypothetical protein [Ricinus communis]
           gi|223529634|gb|EEF31581.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = +3

Query: 114 STMDVAAGDAGFRNATSSPVPYLFGGLSLMLVLMAFALTILACSSHRN-SSLSTSDGNNN 290
           S    AA  AGF +  SSP+PYLFGGL+L+L ++A AL ILACS  ++ S+ ST DG  +
Sbjct: 5   SNSTTAAAAAGFWH-WSSPIPYLFGGLALILGIIAVALIILACSYRKSLSNESTEDG--H 61

Query: 291 NEEKSTKNVEMDEVDNLEPKIVVIMAGDSN 380
            E+   + VE+  VD+ EPKI VIMAGD N
Sbjct: 62  EEKPGARQVEI-MVDSDEPKIAVIMAGDDN 90


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