BLASTX nr result

ID: Glycyrrhiza24_contig00028334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028334
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526253.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   181   8e-44
gb|AFK38776.1| unknown [Lotus japonicus]                              178   4e-43
ref|XP_003540944.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   176   2e-42
ref|XP_003541898.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   169   3e-40
ref|XP_003539541.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   165   5e-39

>ref|XP_003526253.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein NUTCRACKER-like
           [Glycine max]
          Length = 472

 Score =  181 bits (458), Expect = 8e-44
 Identities = 112/178 (62%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
 Frame = +1

Query: 1   CSNPPPQHSNYQLNWVFGTKLNSSNDNNQELT-STTTSIPLGNIVKDATTSQPIPSLYSS 177
           C N PP + NYQL+WVFGTK+ S+N NNQELT STTTS+PLGN       +  IPS YSS
Sbjct: 297 CPNLPPSN-NYQLSWVFGTKI-SNNSNNQELTTSTTTSLPLGN-------TSAIPSWYSS 347

Query: 178 QHQLHQTISNSSANMSATALLQKAAQIGATSTDHPSFLGSLGLKCSANNNISDG--SKFS 351
           QHQ     +  SANMSATALLQKAAQIGATS+D PS+LGSLGLKC  N+   DG  +K+S
Sbjct: 348 QHQPQHQQACPSANMSATALLQKAAQIGATSSD-PSWLGSLGLKCGNNSQGQDGNNNKYS 406

Query: 352 GIFGPSSVL-VSLGSEAENSACDLSQMHHPAKRRHVQNIXXXXXXXXQTRDFLGVGVQ 522
           G++G S VL  +LGSEA+NS C+LSQM HP KRRHV N         QTRDFLGVGVQ
Sbjct: 407 GMYGSSLVLTTTLGSEADNSGCELSQM-HPHKRRHVLN---EESGGGQTRDFLGVGVQ 460


>gb|AFK38776.1| unknown [Lotus japonicus]
          Length = 230

 Score =  178 bits (452), Expect = 4e-43
 Identities = 115/188 (61%), Positives = 131/188 (69%), Gaps = 9/188 (4%)
 Frame = +1

Query: 7   NPPPQHSNYQLNWVFGTKLNSSNDNNQELTSTTTSIPL---GNIVKDATTSQ-PIPSLYS 174
           NPPP  SNYQLNWVFG K  SSN N+QELTSTT S+PL    NIV D   +   +PSLYS
Sbjct: 44  NPPPPPSNYQLNWVFGNKF-SSNGNHQELTSTT-SLPLVNNNNIVNDGAHNLISVPSLYS 101

Query: 175 SQ--HQLHQTISNSSANMSATALLQKAAQIGATSTDHPSFLGSLGLKC--SANNNISDGS 342
           SQ  HQ HQT  ++SANMSATALLQKAAQIG TS+  PSFLGSLGL+   S   +  + +
Sbjct: 102 SQPQHQSHQT--SASANMSATALLQKAAQIGTTSSTDPSFLGSLGLRSCNSPRQDHGNSN 159

Query: 343 KFSGIFGPSSVL-VSLGSEAENSACDLSQMHHPAKRRHVQNIXXXXXXXXQTRDFLGVGV 519
           KF G++  SSV+  S G E EN + DLSQM  PAKRRHVQ+         QTRDFLGVGV
Sbjct: 160 KFCGMYSSSSVVTTSHGCETENYSDDLSQM-PPAKRRHVQS---EESAWAQTRDFLGVGV 215

Query: 520 QNHLPPFI 543
            NHLPPFI
Sbjct: 216 ANHLPPFI 223


>ref|XP_003540944.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein MAGPIE-like
           [Glycine max]
          Length = 466

 Score =  176 bits (447), Expect = 2e-42
 Identities = 111/178 (62%), Positives = 131/178 (73%), Gaps = 5/178 (2%)
 Frame = +1

Query: 4   SNPPPQHSNYQLNWVFGTKLNSSNDNNQELTS---TTTSIPLGNIVKDATTSQPIPSLYS 174
           SN PP + NYQL+WVFGTK+++S+ NNQELT+   TTTS+P+GN          +PSLY 
Sbjct: 294 SNLPPSN-NYQLSWVFGTKISNSS-NNQELTTNTTTTTSLPIGN--------SSVPSLYC 343

Query: 175 SQHQLHQTISNSSANMSATALLQKAAQIGATSTDHPSFLGSLGLKCSANNNISDGS--KF 348
           SQHQ  QT S  SANMSATALLQKAAQIGATS+D PS+LGSLGLKC  N+   DG+  K+
Sbjct: 344 SQHQPQQTCS--SANMSATALLQKAAQIGATSSD-PSWLGSLGLKCG-NSQGQDGNNNKY 399

Query: 349 SGIFGPSSVLVSLGSEAENSACDLSQMHHPAKRRHVQNIXXXXXXXXQTRDFLGVGVQ 522
           S ++G S VL +LGSEA+NSAC+LSQM HP KRRHV N         QTRDFLGVGVQ
Sbjct: 400 SDMYGSSLVLTTLGSEADNSACELSQM-HPHKRRHVLN---EESGGGQTRDFLGVGVQ 453


>ref|XP_003541898.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein MAGPIE-like
           [Glycine max]
          Length = 468

 Score =  169 bits (427), Expect = 3e-40
 Identities = 111/182 (60%), Positives = 127/182 (69%), Gaps = 9/182 (4%)
 Frame = +1

Query: 1   CSNPPPQHSNYQLNWVFGTKLNSSNDNNQELTSTTTSIPLGNIVKDATTSQ--PIPSLYS 174
           CSNPPP  SNYQLNWVFG KL SSN ++QELTST +   + NIVKD    Q   +PSLYS
Sbjct: 286 CSNPPP--SNYQLNWVFGNKL-SSNGSHQELTSTASLPLVNNIVKDNPNLQLISVPSLYS 342

Query: 175 SQHQLHQTISNSSANMSATALLQKAAQIGATSTDHPS-FLGSLGLKCSANNNISDGSKFS 351
           SQHQ HQ    SSANMSATALLQKAAQ+G TS+D  S F GS+GLKC  N+   DG+KF 
Sbjct: 343 SQHQSHQA---SSANMSATALLQKAAQVGTTSSDPSSLFHGSIGLKC--NSPGQDGNKFC 397

Query: 352 GIFGPSSVLVSL--GSEAENS----ACDLSQMHHPAKRRHVQNIXXXXXXXXQTRDFLGV 513
           G++G SSVL +   GSEAEN+    + DLSQ+  P KRRHVQN         QTRDFLGV
Sbjct: 398 GMYGSSSVLTTSHHGSEAENNNNNYSGDLSQI-PPTKRRHVQN---EESAWGQTRDFLGV 453

Query: 514 GV 519
           GV
Sbjct: 454 GV 455


>ref|XP_003539541.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein MAGPIE-like
           [Glycine max]
          Length = 475

 Score =  165 bits (417), Expect = 5e-39
 Identities = 109/184 (59%), Positives = 124/184 (67%), Gaps = 12/184 (6%)
 Frame = +1

Query: 1   CSNPPPQHSNYQLNWVFGTKLNSSNDNNQELTSTTTSIPLGNIVKDATTSQ--PIPSLYS 174
           CSNPPP  SNYQLNWV G KL S+N ++QELTST +   + NIVKD    Q   +PSLYS
Sbjct: 289 CSNPPP--SNYQLNWVLGNKL-STNGSHQELTSTASLPLVNNIVKDNPNLQLISVPSLYS 345

Query: 175 SQHQLHQTISNSSANMSATALLQKAAQIGATSTDHPS-FLGSLGLKCSANNNISDGSKFS 351
           SQHQ HQT   +SANMSATALLQKAAQIG TS+D  S FL S+GLKC  N+   DG+KF 
Sbjct: 346 SQHQSHQT---TSANMSATALLQKAAQIGTTSSDPSSLFLASIGLKC--NSPGQDGNKFC 400

Query: 352 GIFGPSSVLVSLGSEAENS---------ACDLSQMHHPAKRRHVQNIXXXXXXXXQTRDF 504
           G++G SSVL S  SEAEN+         + DLSQM  P KR HVQN         QTRDF
Sbjct: 401 GMYGSSSVLTSHWSEAENNNNNNNNHNHSGDLSQM-PPTKRLHVQN---EESAWGQTRDF 456

Query: 505 LGVG 516
           LGVG
Sbjct: 457 LGVG 460


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