BLASTX nr result

ID: Glycyrrhiza24_contig00028324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028324
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520561.1| PREDICTED: basic 7S globulin-like [Glycine max]    77   1e-12
gb|ABK95620.1| unknown [Populus trichocarpa]                           57   2e-06
ref|XP_002329226.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06
ref|XP_002329225.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06
ref|XP_002329224.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06

>ref|XP_003520561.1| PREDICTED: basic 7S globulin-like [Glycine max]
          Length = 427

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 32/44 (72%), Positives = 40/44 (90%)
 Frame = +3

Query: 96  PVFAPVSKDNSTQFYTLSIYLKTPPQPTKLHLHLGSSFTWLLCD 227
           P+ AP+SKD++TQ YTLS++LKTP QPTKLHLHLGSS +W+LCD
Sbjct: 27  PLIAPISKDDTTQLYTLSVFLKTPLQPTKLHLHLGSSLSWVLCD 70


>gb|ABK95620.1| unknown [Populus trichocarpa]
          Length = 450

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/48 (50%), Positives = 35/48 (72%)
 Frame = +3

Query: 84  QAPTPVFAPVSKDNSTQFYTLSIYLKTPPQPTKLHLHLGSSFTWLLCD 227
           QA  P+  P+ KD+ST  Y ++ YL+TP +PTKL L LG+++TW+ CD
Sbjct: 23  QAALPLQTPIQKDHSTSQYVITAYLQTPLKPTKLLLDLGATYTWVNCD 70


>ref|XP_002329226.1| predicted protein [Populus trichocarpa] gi|222871007|gb|EEF08138.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 23/45 (51%), Positives = 33/45 (73%)
 Frame = +3

Query: 93  TPVFAPVSKDNSTQFYTLSIYLKTPPQPTKLHLHLGSSFTWLLCD 227
           TP+  P+ KD+ST  Y ++ YLKTP  PTKL L LG++++W+ CD
Sbjct: 28  TPLQTPIQKDHSTSQYIITAYLKTPLMPTKLVLDLGATYSWVNCD 72


>ref|XP_002329225.1| predicted protein [Populus trichocarpa] gi|222871006|gb|EEF08137.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 23/45 (51%), Positives = 33/45 (73%)
 Frame = +3

Query: 93  TPVFAPVSKDNSTQFYTLSIYLKTPPQPTKLHLHLGSSFTWLLCD 227
           TP+  P+ KD+ST  Y ++ YLKTP  PTKL L LG++++W+ CD
Sbjct: 28  TPLQTPIQKDHSTSQYIITAYLKTPLMPTKLVLDLGATYSWVNCD 72


>ref|XP_002329224.1| predicted protein [Populus trichocarpa] gi|222871005|gb|EEF08136.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 23/45 (51%), Positives = 33/45 (73%)
 Frame = +3

Query: 93  TPVFAPVSKDNSTQFYTLSIYLKTPPQPTKLHLHLGSSFTWLLCD 227
           TP+  P+ KD+ST  Y ++ YLKTP  PTKL L LG++++W+ CD
Sbjct: 28  TPLQTPIQKDHSTSQYIITAYLKTPLMPTKLVLDLGATYSWVNCD 72


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