BLASTX nr result

ID: Glycyrrhiza24_contig00028302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028302
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517612.1| PREDICTED: microtubule-associated protein SP...   385   e-105
emb|CBI24067.3| unnamed protein product [Vitis vinifera]              244   2e-62
ref|XP_002266058.1| PREDICTED: microtubule-associated protein SP...   244   2e-62
ref|XP_002527814.1| Microtubule-associated protein TORTIFOLIA1, ...   239   5e-61
ref|XP_002308133.1| predicted protein [Populus trichocarpa] gi|2...   239   8e-61

>ref|XP_003517612.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Glycine max]
          Length = 805

 Score =  385 bits (990), Expect = e-105
 Identities = 211/290 (72%), Positives = 229/290 (78%), Gaps = 2/290 (0%)
 Frame = -2

Query: 866  FGEEISCIDEQMYSXXXXXXMQHRRSSDSTVTEPSPQTTHECCAQMATEMICIQNQLSDI 687
            F EEI+  DE++        MQH  SSDSTVTEP+ QT HECC QMA EMICIQNQLSDI
Sbjct: 445  FSEEITS-DERV-------KMQHPTSSDSTVTEPTHQTAHECCMQMANEMICIQNQLSDI 496

Query: 686  EIKQANMMHQLQMFMTGTMDALSTIQSRMGGLENVLDRLTQESLQGGRHSCSENSKLVRQ 507
            EIKQANMMHQLQMF TG MDALSTIQSR+ GLENV DRL+QESLQ GRHS SENSKL RQ
Sbjct: 497  EIKQANMMHQLQMFTTGIMDALSTIQSRITGLENVFDRLSQESLQRGRHSYSENSKLGRQ 556

Query: 506  SQNVASPRFSIC--TPKPSAETSNKQSGLFSAKNSESWEKRTFSRSQSRIHSGDSADMWK 333
            S+NVASPRFSIC  TP+PS E +NKQS   S KNSESWEK+ FSRSQ RIHSGDS DMWK
Sbjct: 557  SENVASPRFSICTPTPRPSVEINNKQSDSMSVKNSESWEKKAFSRSQPRIHSGDSLDMWK 616

Query: 332  TYKVKIAKKITEKDILNSSGEDAQSTGSAKVRKNDGKFFSSAAKTNARSGCSESNTDYRK 153
            + KVK  +K TEKD+LNSS +D    GS    KNDG  FS+   TNAR+ CSESN +Y K
Sbjct: 617  SNKVKATRKFTEKDVLNSSSKDTLQMGSV---KNDG-IFSATRITNARNDCSESNNNYWK 672

Query: 152  CVKRLVCEGDLNSAYMEALCSSDELILVELLNKTGPVIESLSVKTVNVLL 3
             VKRLVCEGDLNSAY EALC SDE ILVELLN TGPVIESLSVKT+NVLL
Sbjct: 673  HVKRLVCEGDLNSAYREALCFSDEFILVELLNTTGPVIESLSVKTMNVLL 722


>emb|CBI24067.3| unnamed protein product [Vitis vinifera]
          Length = 831

 Score =  244 bits (623), Expect = 2e-62
 Identities = 137/286 (47%), Positives = 186/286 (65%)
 Frame = -2

Query: 860  EEISCIDEQMYSXXXXXXMQHRRSSDSTVTEPSPQTTHECCAQMATEMICIQNQLSDIEI 681
            EEIS  +EQ++       +Q RRS DSTVTE S Q    CC Q A EM+ I+ QL +IE 
Sbjct: 470  EEISS-EEQIF----LAKVQDRRSLDSTVTELSSQPVRGCCLQTANEMVSIRKQLLEIEN 524

Query: 680  KQANMMHQLQMFMTGTMDALSTIQSRMGGLENVLDRLTQESLQGGRHSCSENSKLVRQSQ 501
            KQ+++M  LQ+F T TMD+LS IQS++ GLE+V+DRL Q+ + G ++S    +KL+R+ Q
Sbjct: 525  KQSSLMDLLQVFTTRTMDSLSMIQSKVLGLEHVVDRLAQDLVHGVKYSDLAGTKLLRKGQ 584

Query: 500  NVASPRFSICTPKPSAETSNKQSGLFSAKNSESWEKRTFSRSQSRIHSGDSADMWKTYKV 321
            NVASPR S CTP+PS +  NKQ+ L S KN+E WE+RTFSRS+S   +    ++W     
Sbjct: 585  NVASPRLSTCTPRPSIDLPNKQATLTSMKNTEIWEERTFSRSRSINSAKQDMEIWTDTTA 644

Query: 320  KIAKKITEKDILNSSGEDAQSTGSAKVRKNDGKFFSSAAKTNARSGCSESNTDYRKCVKR 141
            KI +    K I N+S +  Q+    + RK D  F  ++     ++G SE       CVK 
Sbjct: 645  KINRNSVRKGIQNNSVKGTQNMACIQTRKTDAVFLPASIGNTKQNG-SECKNSLWHCVKG 703

Query: 140  LVCEGDLNSAYMEALCSSDELILVELLNKTGPVIESLSVKTVNVLL 3
             +CEGD+ SAY+EALCS DEL+LVELL++TGPV+E LS KTVN +L
Sbjct: 704  FLCEGDIESAYVEALCSGDELVLVELLDRTGPVLECLSHKTVNDIL 749


>ref|XP_002266058.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Vitis
            vinifera]
          Length = 838

 Score =  244 bits (623), Expect = 2e-62
 Identities = 137/286 (47%), Positives = 186/286 (65%)
 Frame = -2

Query: 860  EEISCIDEQMYSXXXXXXMQHRRSSDSTVTEPSPQTTHECCAQMATEMICIQNQLSDIEI 681
            EEIS  +EQ++       +Q RRS DSTVTE S Q    CC Q A EM+ I+ QL +IE 
Sbjct: 470  EEISS-EEQIF----LAKVQDRRSLDSTVTELSSQPVRGCCLQTANEMVSIRKQLLEIEN 524

Query: 680  KQANMMHQLQMFMTGTMDALSTIQSRMGGLENVLDRLTQESLQGGRHSCSENSKLVRQSQ 501
            KQ+++M  LQ+F T TMD+LS IQS++ GLE+V+DRL Q+ + G ++S    +KL+R+ Q
Sbjct: 525  KQSSLMDLLQVFTTRTMDSLSMIQSKVLGLEHVVDRLAQDLVHGVKYSDLAGTKLLRKGQ 584

Query: 500  NVASPRFSICTPKPSAETSNKQSGLFSAKNSESWEKRTFSRSQSRIHSGDSADMWKTYKV 321
            NVASPR S CTP+PS +  NKQ+ L S KN+E WE+RTFSRS+S   +    ++W     
Sbjct: 585  NVASPRLSTCTPRPSIDLPNKQATLTSMKNTEIWEERTFSRSRSINSAKQDMEIWTDTTA 644

Query: 320  KIAKKITEKDILNSSGEDAQSTGSAKVRKNDGKFFSSAAKTNARSGCSESNTDYRKCVKR 141
            KI +    K I N+S +  Q+    + RK D  F  ++     ++G SE       CVK 
Sbjct: 645  KINRNSVRKGIQNNSVKGTQNMACIQTRKTDAVFLPASIGNTKQNG-SECKNSLWHCVKG 703

Query: 140  LVCEGDLNSAYMEALCSSDELILVELLNKTGPVIESLSVKTVNVLL 3
             +CEGD+ SAY+EALCS DEL+LVELL++TGPV+E LS KTVN +L
Sbjct: 704  FLCEGDIESAYVEALCSGDELVLVELLDRTGPVLECLSHKTVNDIL 749


>ref|XP_002527814.1| Microtubule-associated protein TORTIFOLIA1, putative [Ricinus
            communis] gi|223532788|gb|EEF34566.1|
            Microtubule-associated protein TORTIFOLIA1, putative
            [Ricinus communis]
          Length = 840

 Score =  239 bits (611), Expect = 5e-61
 Identities = 131/280 (46%), Positives = 187/280 (66%)
 Frame = -2

Query: 842  DEQMYSXXXXXXMQHRRSSDSTVTEPSPQTTHECCAQMATEMICIQNQLSDIEIKQANMM 663
            +EQ YS       + RRS DSTVTE S Q +H CC+QMA EM C+Q QL +IE KQ+N+M
Sbjct: 482  EEQTYSAQI----RDRRSLDSTVTETSFQPSHGCCSQMANEMACVQKQLLEIENKQSNLM 537

Query: 662  HQLQMFMTGTMDALSTIQSRMGGLENVLDRLTQESLQGGRHSCSENSKLVRQSQNVASPR 483
              LQ+F +G MD LS ++S++  LE+ +DR+ Q  + G RHS S  SKL++Q+Q+V+SPR
Sbjct: 538  EMLQVFSSGIMDNLSILRSKVSVLEHEVDRIAQALMHGARHSDSAISKLMKQNQSVSSPR 597

Query: 482  FSICTPKPSAETSNKQSGLFSAKNSESWEKRTFSRSQSRIHSGDSADMWKTYKVKIAKKI 303
            FS  TP+PS +  N+QS L +AKNS+ WE++T++RS+S   +    ++W     K  K  
Sbjct: 598  FSTSTPRPSVDIRNRQSSLLAAKNSDIWEEKTYNRSRSSNLAKQGTEIWTNPTAKTHKND 657

Query: 302  TEKDILNSSGEDAQSTGSAKVRKNDGKFFSSAAKTNARSGCSESNTDYRKCVKRLVCEGD 123
               D+  S+G+ AQS      RK D    +S +  NAR     +++   + VK  +CEGD
Sbjct: 658  IRTDMQKSTGQRAQS--MCCTRKVDAA-LASVSSANARENGQVNSSYLWQRVKGFLCEGD 714

Query: 122  LNSAYMEALCSSDELILVELLNKTGPVIESLSVKTVNVLL 3
            L+SAY+EALCS+DEL+L+ELL++TGPV+ESLS KTV+ +L
Sbjct: 715  LDSAYVEALCSTDELLLIELLDRTGPVLESLSHKTVSDIL 754


>ref|XP_002308133.1| predicted protein [Populus trichocarpa] gi|222854109|gb|EEE91656.1|
            predicted protein [Populus trichocarpa]
          Length = 811

 Score =  239 bits (609), Expect = 8e-61
 Identities = 130/265 (49%), Positives = 176/265 (66%)
 Frame = -2

Query: 797  RRSSDSTVTEPSPQTTHECCAQMATEMICIQNQLSDIEIKQANMMHQLQMFMTGTMDALS 618
            RRS DS VTE S QT H CC+Q+A+EM CI+ QL ++E KQ N+M  LQ+F TG MD LS
Sbjct: 489  RRSIDSAVTENSFQTLHGCCSQVASEMACIRKQLLEMENKQLNLMELLQVFSTGVMDNLS 548

Query: 617  TIQSRMGGLENVLDRLTQESLQGGRHSCSENSKLVRQSQNVASPRFSICTPKPSAETSNK 438
             +QS++ GLE+ +DR+ Q  +Q GR S S  S+L++Q+Q V+SPR S  TP+PS +  N+
Sbjct: 549  ILQSKVSGLEHEVDRIGQVLVQDGRRSDSAISRLMKQNQTVSSPRPSTYTPRPSVDIRNR 608

Query: 437  QSGLFSAKNSESWEKRTFSRSQSRIHSGDSADMWKTYKVKIAKKITEKDILNSSGEDAQS 258
            QS L SAKNS+ WE + FSRS+    + +  +MW    VK ++    KD+   SG+ AQ+
Sbjct: 609  QSSLLSAKNSDIWEGKNFSRSRPINPAKNGTEMWANPTVKTSRNAIGKDMQKRSGQGAQN 668

Query: 257  TGSAKVRKNDGKFFSSAAKTNARSGCSESNTDYRKCVKRLVCEGDLNSAYMEALCSSDEL 78
             G A  RK D   F+  +  N+R    ES     +CVK  +CEGDL SAY EALCS DEL
Sbjct: 669  MGQA--RKVD-SVFAPLSSANSRQSGPESKNCVWQCVKDFLCEGDLESAYEEALCSIDEL 725

Query: 77   ILVELLNKTGPVIESLSVKTVNVLL 3
            +L+EL+++TGPV+ESLS KT   +L
Sbjct: 726  VLIELIDRTGPVLESLSSKTAGDVL 750


Top