BLASTX nr result

ID: Glycyrrhiza24_contig00028301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028301
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275253.1| PREDICTED: U-box domain-containing protein 6...   144   6e-33
emb|CAN61689.1| hypothetical protein VITISV_024206 [Vitis vinifera]   144   6e-33
ref|XP_003522509.1| PREDICTED: U-box domain-containing protein 6...   134   7e-30
ref|XP_003528015.1| PREDICTED: U-box domain-containing protein 6...   132   2e-29
gb|AFK49229.1| unknown [Medicago truncatula]                          128   5e-28

>ref|XP_002275253.1| PREDICTED: U-box domain-containing protein 62-like [Vitis vinifera]
          Length = 441

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/114 (63%), Positives = 87/114 (76%)
 Frame = -1

Query: 343 MSSEDIGLVPDQRIDNSLTSPPLVFQDDPLRFNCGTAPHRRVGDPGPKTRELAGGFIDEK 164
           M+SE++G VP QR++N L S  LVFQD+ LRFNCG AP RRVGDPGPKTREL+  FIDEK
Sbjct: 1   MASEEVGFVPPQRLENGLNSQ-LVFQDEALRFNCG-APQRRVGDPGPKTRELSS-FIDEK 57

Query: 163 MFAIDRDRFFTAQGSEFRRSVYADCHGRRDNPDDRNWSGNGGASTPSGDDSDGD 2
           MF ++RDR+F  QG EFRRS+Y D    R  PD RNW+GNG   TPSG+ S+G+
Sbjct: 58  MFCVERDRYFHPQGGEFRRSIYGDAPPER--PDGRNWNGNGNTPTPSGEGSEGE 109


>emb|CAN61689.1| hypothetical protein VITISV_024206 [Vitis vinifera]
          Length = 452

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/114 (63%), Positives = 87/114 (76%)
 Frame = -1

Query: 343 MSSEDIGLVPDQRIDNSLTSPPLVFQDDPLRFNCGTAPHRRVGDPGPKTRELAGGFIDEK 164
           M+SE++G VP QR++N L S  LVFQD+ LRFNCG AP RRVGDPGPKTREL+  FIDEK
Sbjct: 1   MASEEVGFVPPQRLENGLNSQ-LVFQDEALRFNCG-APQRRVGDPGPKTRELSS-FIDEK 57

Query: 163 MFAIDRDRFFTAQGSEFRRSVYADCHGRRDNPDDRNWSGNGGASTPSGDDSDGD 2
           MF ++RDR+F  QG EFRRS+Y D    R  PD RNW+GNG   TPSG+ S+G+
Sbjct: 58  MFCVERDRYFHPQGGEFRRSIYGDAPPER--PDGRNWNGNGNTPTPSGEGSEGE 109


>ref|XP_003522509.1| PREDICTED: U-box domain-containing protein 62-like [Glycine max]
          Length = 426

 Score =  134 bits (338), Expect = 7e-30
 Identities = 75/115 (65%), Positives = 77/115 (66%), Gaps = 1/115 (0%)
 Frame = -1

Query: 343 MSSEDIGLVPDQRIDNSLTSPPLVFQDDPLRFNCGTAPHRRVGDPGPKTRELAGGFIDEK 164
           MSSEDI LVPDQRI+N L SP LVFQDDPLRFNC T   RRVGDP PKTREL G FID+ 
Sbjct: 1   MSSEDITLVPDQRIENGLNSP-LVFQDDPLRFNCPTPHQRRVGDPPPKTREL-GAFIDDN 58

Query: 163 MFAIDRDRFF-TAQGSEFRRSVYADCHGRRDNPDDRNWSGNGGASTPSGDDSDGD 2
              IDRDRFF  AQ  EFRR  YADC  RRD P  RNWS          DD D D
Sbjct: 59  KMFIDRDRFFAAAQNPEFRR--YADCSARRDPPHARNWSATDDDEESDDDDEDDD 111


>ref|XP_003528015.1| PREDICTED: U-box domain-containing protein 62-like [Glycine max]
          Length = 428

 Score =  132 bits (333), Expect = 2e-29
 Identities = 77/115 (66%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
 Frame = -1

Query: 343 MSSEDIGLVPDQRIDNSLTSPPLVFQDDPLRFNCGTAPHRRVGDPGPKTRELAGGFIDEK 164
           MSSEDI LVPDQRI+N L SP LVFQDDPLRFNC T  HRRVGDP PKTREL G FID+ 
Sbjct: 1   MSSEDITLVPDQRIENGLNSP-LVFQDDPLRFNCPTPHHRRVGDPPPKTREL-GSFIDDN 58

Query: 163 MFAIDRDRFF-TAQGSEFRRSVYADCHGRRDNPDDRNWSGNGGASTPSGDDSDGD 2
              IDRDRFF  A   EFRR  YADC  RR   D RNW+ NG A+    DDSD D
Sbjct: 59  KMFIDRDRFFAAAHNPEFRR--YADCSARR---DPRNWNTNGSAT--EDDDSDDD 106


>gb|AFK49229.1| unknown [Medicago truncatula]
          Length = 432

 Score =  128 bits (322), Expect = 5e-28
 Identities = 70/115 (60%), Positives = 84/115 (73%), Gaps = 1/115 (0%)
 Frame = -1

Query: 343 MSSEDIGLVPDQRIDNSLTSPPLVFQDDPLRFNCGTAPHRRVGDPGPKTRELAGGFIDEK 164
           MSS+DI L PDQRI+N LTSP LVF D  LRFNCG AP R+VGDP PKT    GGFID+K
Sbjct: 1   MSSDDINLTPDQRIENGLTSP-LVFPDHSLRFNCGGAPPRQVGDPVPKT----GGFIDDK 55

Query: 163 MFAIDRDRFFTAQGSEFRRSVYADCHGRRDNPDD-RNWSGNGGASTPSGDDSDGD 2
           MF ++RD+FF +QG+EFRR+V++D    R NP D  NWS      TPS +DSDG+
Sbjct: 56  MFTVNRDQFFPSQGTEFRRNVFSD----RGNPSDVLNWS----EGTPSSNDSDGE 102


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