BLASTX nr result

ID: Glycyrrhiza24_contig00028297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028297
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624717.1| Cation/calcium exchanger [Medicago truncatul...   103   1e-20
ref|XP_003553350.1| PREDICTED: cation/calcium exchanger 4-like [...    94   9e-18
ref|XP_003528057.1| PREDICTED: cation/calcium exchanger 4-like [...    82   3e-14
ref|XP_002336634.1| Ca2+ antiporter/cation exchanger [Populus tr...    82   5e-14
ref|XP_002525681.1| Sodium/potassium/calcium exchanger 6 precurs...    77   1e-12

>ref|XP_003624717.1| Cation/calcium exchanger [Medicago truncatula]
           gi|355499732|gb|AES80935.1| Cation/calcium exchanger
           [Medicago truncatula]
          Length = 589

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
 Frame = +3

Query: 3   NTSSLLVFCASFIVHFHSSEHANFLLLLRSNR--FAFGDTVDQDCKNFHSLSDYKAKCLF 176
           NTS LL+FC   ++HF S EH        +N   F  G T D+DCK+FHSLSDYKAKC +
Sbjct: 17  NTSFLLLFCVFLVLHFQSYEHVFLRNKTNNNNRNFVSGVTDDEDCKSFHSLSDYKAKCFY 76

Query: 177 LKSNNPCVTQGYIDYLYLF 233
           LKSNNPCVTQGY+DYLY+F
Sbjct: 77  LKSNNPCVTQGYVDYLYIF 95


>ref|XP_003553350.1| PREDICTED: cation/calcium exchanger 4-like [Glycine max]
          Length = 572

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 51/79 (64%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
 Frame = +3

Query: 3   NTSSL-LVFCASFIVHFHSS-EHANFLLLLRSNRFAFGDTVDQDCKNFHSLSDYKAKCLF 176
           NTS L +VFC S IV FHSS EH    ++LRSNR       +QDCK+FHSL D KAKCL+
Sbjct: 8   NTSFLVIVFCVSLIVPFHSSSEH----VVLRSNRVGLRGE-EQDCKSFHSLEDSKAKCLY 62

Query: 177 LKSNNPCVTQGYIDYLYLF 233
           LKSN+PCV+QGY+DYLYLF
Sbjct: 63  LKSNDPCVSQGYVDYLYLF 81


>ref|XP_003528057.1| PREDICTED: cation/calcium exchanger 4-like [Glycine max]
          Length = 411

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/77 (51%), Positives = 54/77 (70%)
 Frame = +3

Query: 3   NTSSLLVFCASFIVHFHSSEHANFLLLLRSNRFAFGDTVDQDCKNFHSLSDYKAKCLFLK 182
           NT  LLV  +  IVHFH+ E     +++ +   AF +  +Q+C++  SL DYKAKCL+LK
Sbjct: 8   NTCFLLVIFSFMIVHFHTPE-----VVVVTKISAFDNIKEQECESLDSLGDYKAKCLYLK 62

Query: 183 SNNPCVTQGYIDYLYLF 233
           SN+PC +QGYIDYLYLF
Sbjct: 63  SNDPCASQGYIDYLYLF 79


>ref|XP_002336634.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa]
           gi|222836394|gb|EEE74801.1| Ca2+ antiporter/cation
           exchanger [Populus trichocarpa]
          Length = 112

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/77 (57%), Positives = 50/77 (64%)
 Frame = +3

Query: 3   NTSSLLVFCASFIVHFHSSEHANFLLLLRSNRFAFGDTVDQDCKNFHSLSDYKAKCLFLK 182
           N S LLV C   I+ F S   A FL+L  S  F   D   QDC+  HSL DYKAKC ++K
Sbjct: 15  NISFLLVACVFLIMQFSS---AGFLVLGSSQSFKEND--QQDCQGLHSLDDYKAKCSYIK 69

Query: 183 SNNPCVTQGYIDYLYLF 233
           SN PCV+QGYIDYLYLF
Sbjct: 70  SNIPCVSQGYIDYLYLF 86


>ref|XP_002525681.1| Sodium/potassium/calcium exchanger 6 precursor, putative [Ricinus
           communis] gi|223534981|gb|EEF36664.1|
           Sodium/potassium/calcium exchanger 6 precursor, putative
           [Ricinus communis]
          Length = 576

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/77 (51%), Positives = 50/77 (64%)
 Frame = +3

Query: 3   NTSSLLVFCASFIVHFHSSEHANFLLLLRSNRFAFGDTVDQDCKNFHSLSDYKAKCLFLK 182
           N S LLV C   I+ F+S E    +L LR +  +      QDCKN  S+ DYKAKC +LK
Sbjct: 18  NFSFLLVACVFLIIQFNSLE----ILDLRISELSNDRGDQQDCKNLQSVGDYKAKCRYLK 73

Query: 183 SNNPCVTQGYIDYLYLF 233
           S+ PCVT+GYIDYL+LF
Sbjct: 74  SHGPCVTEGYIDYLHLF 90


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