BLASTX nr result

ID: Glycyrrhiza24_contig00028278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028278
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593490.1| hypothetical protein MTR_2g012750 [Medicago ...   133   1e-29
ref|XP_002305008.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002317233.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002521410.1| conserved hypothetical protein [Ricinus comm...    60   1e-07

>ref|XP_003593490.1| hypothetical protein MTR_2g012750 [Medicago truncatula]
           gi|355482538|gb|AES63741.1| hypothetical protein
           MTR_2g012750 [Medicago truncatula]
          Length = 265

 Score =  133 bits (335), Expect = 1e-29
 Identities = 68/97 (70%), Positives = 80/97 (82%)
 Frame = +2

Query: 71  INGSPARIHRNRSFSGERRDKTPGKSPARRSDQSPGKRNVGSARVVAQSRDQMGNGVTRN 250
           +NGSPA++ +N SFSGERR+    KSPARR +QSP KRN+GS+R+V Q RDQMGNG  +N
Sbjct: 122 VNGSPAKMRKNGSFSGERRESPARKSPARRLEQSPAKRNIGSSRIV-QRRDQMGNGGIKN 180

Query: 251 QPRRRDAGENSGRRSRSPATRIDSVATRSVVGRSPSA 361
           QP RRDAGE SGRRSRSPATR D+ +TRSVVGRS SA
Sbjct: 181 QPHRRDAGEVSGRRSRSPATRTDNGSTRSVVGRSLSA 217


>ref|XP_002305008.1| predicted protein [Populus trichocarpa] gi|222847972|gb|EEE85519.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 47/90 (52%), Positives = 58/90 (64%), Gaps = 11/90 (12%)
 Frame = +2

Query: 122 RRDKTPGKSPARRS-DQSPGKRNV----GSARVVAQSRDQMGNGV------TRNQPRRRD 268
           R+D+  GKSP RR+ +QSP KRN     GS R+V QSR+ MG+G       +R  P++RD
Sbjct: 174 RKDRVVGKSPTRRTTEQSPSKRNGAINGGSVRLV-QSRE-MGSGQAGVRRGSRPDPKKRD 231

Query: 269 AGENSGRRSRSPATRIDSVATRSVVGRSPS 358
            GE S RRSRSPAT       RSV+GRSPS
Sbjct: 232 PGEGSARRSRSPAT------NRSVMGRSPS 255


>ref|XP_002317233.1| predicted protein [Populus trichocarpa] gi|222860298|gb|EEE97845.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 43/90 (47%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
 Frame = +2

Query: 116 GERRDKTPGKSPARRS-DQSPGKRNV----GSARVVAQSRDQMGN-GVTRN---QPRRRD 268
           G R+D+  G+SPARR+ +QSP KRN     G  R+V       G  G+ R     P RRD
Sbjct: 170 GPRKDRVVGRSPARRTTEQSPSKRNGAMKGGPVRLVQGRETGSGQVGIRRGLRPDPNRRD 229

Query: 269 AGENSGRRSRSPATRIDSVATRSVVGRSPS 358
            GE S RRSRSPAT       RS++GRSPS
Sbjct: 230 PGEGSARRSRSPAT------NRSLMGRSPS 253


>ref|XP_002521410.1| conserved hypothetical protein [Ricinus communis]
           gi|223539309|gb|EEF40900.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 317

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
 Frame = +2

Query: 86  ARIHRNRSFSGE---RRDKTPGKSPARRSDQSPGKRNVGSAR--------VVAQSRD--- 223
           +R  RN+  SG+   R+D+  GKSP+RR++QSP +RN  + R         + QS+    
Sbjct: 156 SRFPRNQPISGDFGPRKDRVVGKSPSRRTEQSPDRRNNFTGRGGGGTGAMSLVQSKGSIN 215

Query: 224 -QMGNGVTRNQPRRRDAGENSGRRSRSPATRIDSVATRSVVGRSPS 358
            Q G    R+   R+D GE SGRRSRSPA        RS +GR  S
Sbjct: 216 YQAGRRGLRSDSSRKDPGEGSGRRSRSPA------INRSTMGRCSS 255


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