BLASTX nr result
ID: Glycyrrhiza24_contig00028275
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00028275 (240 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li... 150 8e-35 ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li... 149 3e-34 ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2... 119 3e-25 ref|XP_002332259.1| predicted protein [Populus trichocarpa] gi|2... 107 1e-21 ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22... 106 2e-21 >ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max] Length = 1334 Score = 150 bits (380), Expect = 8e-35 Identities = 70/79 (88%), Positives = 74/79 (93%) Frame = -3 Query: 238 WDFLHHHWQLLDKHEVEGEFKSPFVQRNSFEEAENIECNSVAWASDRVFLLQTISNVSVE 59 W+FLHHHWQLLDKHEVEGEFKSPFVQRN+ EE E+IECN VAWASDRVFLLQTISNVSVE Sbjct: 653 WEFLHHHWQLLDKHEVEGEFKSPFVQRNASEEEESIECNHVAWASDRVFLLQTISNVSVE 712 Query: 58 LPPEPAADLAHNLLKRFEE 2 LPP PAADLAHNLLKR E+ Sbjct: 713 LPPVPAADLAHNLLKRVEQ 731 >ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max] Length = 1324 Score = 149 bits (375), Expect = 3e-34 Identities = 69/76 (90%), Positives = 72/76 (94%) Frame = -3 Query: 238 WDFLHHHWQLLDKHEVEGEFKSPFVQRNSFEEAENIECNSVAWASDRVFLLQTISNVSVE 59 W+FLHHHWQLLDKHEVEGEFKSPFVQRN+ E E+IECN VAWASDRVFLLQTISNVSVE Sbjct: 643 WEFLHHHWQLLDKHEVEGEFKSPFVQRNASAEEESIECNHVAWASDRVFLLQTISNVSVE 702 Query: 58 LPPEPAADLAHNLLKR 11 LPPEPAADLAHNLLKR Sbjct: 703 LPPEPAADLAHNLLKR 718 >ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1| predicted protein [Populus trichocarpa] Length = 1272 Score = 119 bits (298), Expect = 3e-25 Identities = 56/79 (70%), Positives = 63/79 (79%) Frame = -3 Query: 238 WDFLHHHWQLLDKHEVEGEFKSPFVQRNSFEEAENIECNSVAWASDRVFLLQTISNVSVE 59 W+FLHHHWQLLDK+ GEFKSP + E+ + IE +SV W SDRVFLLQTISNVSVE Sbjct: 588 WEFLHHHWQLLDKYRAVGEFKSPCPKEFMHEDEDGIESSSVEWVSDRVFLLQTISNVSVE 647 Query: 58 LPPEPAADLAHNLLKRFEE 2 LPPEPAA+LAHNLL R EE Sbjct: 648 LPPEPAAELAHNLLIRIEE 666 >ref|XP_002332259.1| predicted protein [Populus trichocarpa] gi|222832024|gb|EEE70501.1| predicted protein [Populus trichocarpa] Length = 455 Score = 107 bits (267), Expect = 1e-21 Identities = 48/74 (64%), Positives = 61/74 (82%) Frame = -3 Query: 235 DFLHHHWQLLDKHEVEGEFKSPFVQRNSFEEAENIECNSVAWASDRVFLLQTISNVSVEL 56 +FLH++WQ+LDK+ GEFKSP+ + E+ ++IE NS+AWA DRV LLQTISNVSVEL Sbjct: 382 EFLHYYWQILDKYRAAGEFKSPYPKEFVHEDVDDIESNSIAWAGDRVSLLQTISNVSVEL 441 Query: 55 PPEPAADLAHNLLK 14 PPEPAA+L HNLL+ Sbjct: 442 PPEPAAELGHNLLR 455 >ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1| condensin, putative [Ricinus communis] Length = 1313 Score = 106 bits (265), Expect = 2e-21 Identities = 53/79 (67%), Positives = 59/79 (74%) Frame = -3 Query: 238 WDFLHHHWQLLDKHEVEGEFKSPFVQRNSFEEAENIECNSVAWASDRVFLLQTISNVSVE 59 W+FLHHHWQLLDK E + + + E+ E+ E NSVAWA DRVFLLQTISNVSVE Sbjct: 628 WEFLHHHWQLLDKFGGEPKLNNSVGKGIMHEDEEDSESNSVAWAGDRVFLLQTISNVSVE 687 Query: 58 LPPEPAADLAHNLLKRFEE 2 LP E AADLAHNLLKR EE Sbjct: 688 LPAESAADLAHNLLKRIEE 706