BLASTX nr result

ID: Glycyrrhiza24_contig00028275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028275
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...   150   8e-35
ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...   149   3e-34
ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002332259.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...   106   2e-21

>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score =  150 bits (380), Expect = 8e-35
 Identities = 70/79 (88%), Positives = 74/79 (93%)
 Frame = -3

Query: 238 WDFLHHHWQLLDKHEVEGEFKSPFVQRNSFEEAENIECNSVAWASDRVFLLQTISNVSVE 59
           W+FLHHHWQLLDKHEVEGEFKSPFVQRN+ EE E+IECN VAWASDRVFLLQTISNVSVE
Sbjct: 653 WEFLHHHWQLLDKHEVEGEFKSPFVQRNASEEEESIECNHVAWASDRVFLLQTISNVSVE 712

Query: 58  LPPEPAADLAHNLLKRFEE 2
           LPP PAADLAHNLLKR E+
Sbjct: 713 LPPVPAADLAHNLLKRVEQ 731


>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/76 (90%), Positives = 72/76 (94%)
 Frame = -3

Query: 238 WDFLHHHWQLLDKHEVEGEFKSPFVQRNSFEEAENIECNSVAWASDRVFLLQTISNVSVE 59
           W+FLHHHWQLLDKHEVEGEFKSPFVQRN+  E E+IECN VAWASDRVFLLQTISNVSVE
Sbjct: 643 WEFLHHHWQLLDKHEVEGEFKSPFVQRNASAEEESIECNHVAWASDRVFLLQTISNVSVE 702

Query: 58  LPPEPAADLAHNLLKR 11
           LPPEPAADLAHNLLKR
Sbjct: 703 LPPEPAADLAHNLLKR 718


>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
           predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/79 (70%), Positives = 63/79 (79%)
 Frame = -3

Query: 238 WDFLHHHWQLLDKHEVEGEFKSPFVQRNSFEEAENIECNSVAWASDRVFLLQTISNVSVE 59
           W+FLHHHWQLLDK+   GEFKSP  +    E+ + IE +SV W SDRVFLLQTISNVSVE
Sbjct: 588 WEFLHHHWQLLDKYRAVGEFKSPCPKEFMHEDEDGIESSSVEWVSDRVFLLQTISNVSVE 647

Query: 58  LPPEPAADLAHNLLKRFEE 2
           LPPEPAA+LAHNLL R EE
Sbjct: 648 LPPEPAAELAHNLLIRIEE 666


>ref|XP_002332259.1| predicted protein [Populus trichocarpa] gi|222832024|gb|EEE70501.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/74 (64%), Positives = 61/74 (82%)
 Frame = -3

Query: 235 DFLHHHWQLLDKHEVEGEFKSPFVQRNSFEEAENIECNSVAWASDRVFLLQTISNVSVEL 56
           +FLH++WQ+LDK+   GEFKSP+ +    E+ ++IE NS+AWA DRV LLQTISNVSVEL
Sbjct: 382 EFLHYYWQILDKYRAAGEFKSPYPKEFVHEDVDDIESNSIAWAGDRVSLLQTISNVSVEL 441

Query: 55  PPEPAADLAHNLLK 14
           PPEPAA+L HNLL+
Sbjct: 442 PPEPAAELGHNLLR 455


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
           condensin, putative [Ricinus communis]
          Length = 1313

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/79 (67%), Positives = 59/79 (74%)
 Frame = -3

Query: 238 WDFLHHHWQLLDKHEVEGEFKSPFVQRNSFEEAENIECNSVAWASDRVFLLQTISNVSVE 59
           W+FLHHHWQLLDK   E +  +   +    E+ E+ E NSVAWA DRVFLLQTISNVSVE
Sbjct: 628 WEFLHHHWQLLDKFGGEPKLNNSVGKGIMHEDEEDSESNSVAWAGDRVFLLQTISNVSVE 687

Query: 58  LPPEPAADLAHNLLKRFEE 2
           LP E AADLAHNLLKR EE
Sbjct: 688 LPAESAADLAHNLLKRIEE 706


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