BLASTX nr result

ID: Glycyrrhiza24_contig00028272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028272
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638779.1| WD-40 repeat family [Medicago truncatula] gi...   189   3e-46
ref|XP_003522805.1| PREDICTED: uncharacterized WD repeat-contain...   187   1e-45
ref|XP_002513893.1| WD-repeat protein, putative [Ricinus communi...   183   1e-44
ref|XP_002307391.1| predicted protein [Populus trichocarpa] gi|2...   181   6e-44
ref|XP_002285804.1| PREDICTED: uncharacterized WD repeat-contain...   180   1e-43

>ref|XP_003638779.1| WD-40 repeat family [Medicago truncatula]
           gi|355504714|gb|AES85917.1| WD-40 repeat family
           [Medicago truncatula]
          Length = 457

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/104 (86%), Positives = 97/104 (93%)
 Frame = +3

Query: 216 FETQSNAKTDTSASEARNGKDIQGIPWERLNYSREEYRETRLKQYKNYENLARSREDLDK 395
           F+T SN KTDTSA EARNGKDIQGIPWE+LNYSR+EYRETRLKQYKNYE L RSREDLDK
Sbjct: 57  FQT-SNVKTDTSAFEARNGKDIQGIPWEKLNYSRDEYRETRLKQYKNYECLTRSREDLDK 115

Query: 396 ECLEMQKGKTFYDFQFNTRLVKSTVVHFQLRNLLWATSKHDVYL 527
           ECLE++KG +FYDFQFNTRLVKST+ HFQLRNLLWATSKHDVYL
Sbjct: 116 ECLEVEKGNSFYDFQFNTRLVKSTIAHFQLRNLLWATSKHDVYL 159


>ref|XP_003522805.1| PREDICTED: uncharacterized WD repeat-containing protein
           C2A9.03-like [Glycine max]
          Length = 447

 Score =  187 bits (474), Expect = 1e-45
 Identities = 87/99 (87%), Positives = 95/99 (95%)
 Frame = +3

Query: 228 SNAKTDTSASEARNGKDIQGIPWERLNYSREEYRETRLKQYKNYENLARSREDLDKECLE 407
           SNAKTDT+ASEARNGKDIQGIPWERLNYSR++YRETRLKQYKNY+N +RSR DL KECLE
Sbjct: 50  SNAKTDTTASEARNGKDIQGIPWERLNYSRDKYRETRLKQYKNYQNFSRSRHDLRKECLE 109

Query: 408 MQKGKTFYDFQFNTRLVKSTVVHFQLRNLLWATSKHDVY 524
           +QKG+TFYDF FNTRLVKST+VHFQLRNLLWATSKHDVY
Sbjct: 110 VQKGETFYDFFFNTRLVKSTIVHFQLRNLLWATSKHDVY 148


>ref|XP_002513893.1| WD-repeat protein, putative [Ricinus communis]
           gi|223546979|gb|EEF48476.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 447

 Score =  183 bits (465), Expect = 1e-44
 Identities = 84/98 (85%), Positives = 95/98 (96%)
 Frame = +3

Query: 234 AKTDTSASEARNGKDIQGIPWERLNYSREEYRETRLKQYKNYENLARSREDLDKECLEMQ 413
           AK+DTSA EARNGKDIQGIPWERLN++R++YRETRLKQYKNYENL+RSR+DL KECL+++
Sbjct: 51  AKSDTSALEARNGKDIQGIPWERLNFTRDKYRETRLKQYKNYENLSRSRQDLHKECLQVE 110

Query: 414 KGKTFYDFQFNTRLVKSTVVHFQLRNLLWATSKHDVYL 527
           KGK FYDFQFNTRLVKST+VHFQLRNLLWATSKHDVYL
Sbjct: 111 KGKNFYDFQFNTRLVKSTIVHFQLRNLLWATSKHDVYL 148


>ref|XP_002307391.1| predicted protein [Populus trichocarpa] gi|222856840|gb|EEE94387.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  181 bits (459), Expect = 6e-44
 Identities = 84/100 (84%), Positives = 94/100 (94%)
 Frame = +3

Query: 228 SNAKTDTSASEARNGKDIQGIPWERLNYSREEYRETRLKQYKNYENLARSREDLDKECLE 407
           S  KTDTSA EARNGKDIQGIPWERLN++R++YRETRLKQYKNYENL+R R +L KECLE
Sbjct: 12  SKPKTDTSALEARNGKDIQGIPWERLNFTRDKYRETRLKQYKNYENLSRPRFELHKECLE 71

Query: 408 MQKGKTFYDFQFNTRLVKSTVVHFQLRNLLWATSKHDVYL 527
           ++KGKTFYDF+FNTRLVKST+VHFQLRNLLWATSKHDVYL
Sbjct: 72  VEKGKTFYDFEFNTRLVKSTIVHFQLRNLLWATSKHDVYL 111


>ref|XP_002285804.1| PREDICTED: uncharacterized WD repeat-containing protein C2A9.03
           [Vitis vinifera]
          Length = 450

 Score =  180 bits (456), Expect = 1e-43
 Identities = 87/127 (68%), Positives = 102/127 (80%)
 Frame = +3

Query: 147 AFSGNVPQRXXXXXXXXXXXXXXFETQSNAKTDTSASEARNGKDIQGIPWERLNYSREEY 326
           +FS   PQR              FE  +  KTDTSA EARNGKDIQGIPWERLN++R++Y
Sbjct: 26  SFSETDPQRNSPFEAFDSDVEDNFE-MNKPKTDTSALEARNGKDIQGIPWERLNFTRDKY 84

Query: 327 RETRLKQYKNYENLARSREDLDKECLEMQKGKTFYDFQFNTRLVKSTVVHFQLRNLLWAT 506
           RETRL+QYKNYENL+R RE+L+K+C +++KG TFYDFQFNTRLVKST+VHFQLRNLLWAT
Sbjct: 85  RETRLEQYKNYENLSRPREELEKDCKKIEKGSTFYDFQFNTRLVKSTIVHFQLRNLLWAT 144

Query: 507 SKHDVYL 527
           SKHDVYL
Sbjct: 145 SKHDVYL 151


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