BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028253
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555763.1| PREDICTED: pentatricopeptide repeat-containi...   164   7e-39
ref|XP_003591286.1| Pentatricopeptide repeat-containing protein ...   161   6e-38
emb|CAB83319.1| putative protein [Arabidopsis thaliana]               136   2e-30
ref|NP_001154694.1| nucleobase:cation symporter-1, NCS1 family [...   135   3e-30
ref|XP_002873104.1| predicted protein [Arabidopsis lyrata subsp....   131   5e-29

>ref|XP_003555763.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Glycine max]
          Length = 289

 Score =  164 bits (415), Expect = 7e-39
 Identities = 85/119 (71%), Positives = 93/119 (78%), Gaps = 1/119 (0%)
 Frame = +1

Query: 7   VPNVNSIQRHFSSTNKKNIDTKVNFSLSDDEDVARTKPTENTQKETNKDKKQLPPPYDPF 186
           V N N+I RHFSST KK +DTKVNFSLSD +D           KE    KK +PPPYDPF
Sbjct: 41  VSNSNAIHRHFSST-KKPVDTKVNFSLSDTDD--------EDNKENGTSKKAVPPPYDPF 91

Query: 187 SKKPAIEDPK-DPKDLQEIFHNMRSGDGLLNHAVKMFDALSKEGLTHEALELFGQIKDK 360
           SKKPA+EDP  DPKDLQ+IFHNMR+GDGL +HAVKMFDALSKEGLTHEALELF QIKDK
Sbjct: 92  SKKPAVEDPSSDPKDLQQIFHNMRTGDGLFSHAVKMFDALSKEGLTHEALELFAQIKDK 150


>ref|XP_003591286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480334|gb|AES61537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 276

 Score =  161 bits (407), Expect = 6e-38
 Identities = 80/112 (71%), Positives = 91/112 (81%)
 Frame = +1

Query: 25  IQRHFSSTNKKNIDTKVNFSLSDDEDVARTKPTENTQKETNKDKKQLPPPYDPFSKKPAI 204
           I RHF+STNK  IDTK+NFSLSD +      PT     E +K+   LPPPYDPFSKKPAI
Sbjct: 32  IPRHFTSTNK-TIDTKINFSLSDSDSDDENTPTTTKPTEISKN---LPPPYDPFSKKPAI 87

Query: 205 EDPKDPKDLQEIFHNMRSGDGLLNHAVKMFDALSKEGLTHEALELFGQIKDK 360
           E+P+DPKDLQ+IFH MR+GDGL NHAVKMFDALS++GLTHEALELFGQIKDK
Sbjct: 88  EEPEDPKDLQQIFHKMRTGDGLFNHAVKMFDALSQQGLTHEALELFGQIKDK 139


>emb|CAB83319.1| putative protein [Arabidopsis thaliana]
          Length = 482

 Score =  136 bits (342), Expect = 2e-30
 Identities = 72/120 (60%), Positives = 88/120 (73%)
 Frame = +1

Query: 1   PKVPNVNSIQRHFSSTNKKNIDTKVNFSLSDDEDVARTKPTENTQKETNKDKKQLPPPYD 180
           P++       R FSS  K+ ++TKVNFSLSDD+     + TE    E +K ++  PPPYD
Sbjct: 93  PELRGRRDFVRQFSSETKR-VNTKVNFSLSDDDS---DEETETQVTEDSKKQEPPPPPYD 148

Query: 181 PFSKKPAIEDPKDPKDLQEIFHNMRSGDGLLNHAVKMFDALSKEGLTHEALELFGQIKDK 360
           PFSKKPAIE+P+DPK+LQEIFH MR+ +G  N AVKMFDALSK+G THEALELF QIKDK
Sbjct: 149 PFSKKPAIEEPEDPKNLQEIFHKMRT-EGFTNEAVKMFDALSKDGRTHEALELFSQIKDK 207


>ref|NP_001154694.1| nucleobase:cation symporter-1, NCS1 family [Arabidopsis thaliana]
           gi|332003244|gb|AED90627.1| nucleobase:cation
           symporter-1, NCS1 family [Arabidopsis thaliana]
          Length = 363

 Score =  135 bits (340), Expect = 3e-30
 Identities = 71/110 (64%), Positives = 85/110 (77%)
 Frame = +1

Query: 31  RHFSSTNKKNIDTKVNFSLSDDEDVARTKPTENTQKETNKDKKQLPPPYDPFSKKPAIED 210
           R FSS  K+ ++TKVNFSLSDD+     + TE    E +K ++  PPPYDPFSKKPAIE+
Sbjct: 122 RQFSSETKR-VNTKVNFSLSDDDS---DEETETQVTEDSKKQEPPPPPYDPFSKKPAIEE 177

Query: 211 PKDPKDLQEIFHNMRSGDGLLNHAVKMFDALSKEGLTHEALELFGQIKDK 360
           P+DPK+LQEIFH MR+ +G  N AVKMFDALSK+G THEALELF QIKDK
Sbjct: 178 PEDPKNLQEIFHKMRT-EGFTNEAVKMFDALSKDGRTHEALELFSQIKDK 226


>ref|XP_002873104.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318941|gb|EFH49363.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 478

 Score =  131 bits (330), Expect = 5e-29
 Identities = 71/115 (61%), Positives = 85/115 (73%)
 Frame = +1

Query: 16  VNSIQRHFSSTNKKNIDTKVNFSLSDDEDVARTKPTENTQKETNKDKKQLPPPYDPFSKK 195
           V    R FSS  K+ ++TKVNFSLSDD+    T  TE++ K      + LPPPYDPFSKK
Sbjct: 96  VRGFARQFSSETKR-VNTKVNFSLSDDDSDEETPVTEDSGKP-----EFLPPPYDPFSKK 149

Query: 196 PAIEDPKDPKDLQEIFHNMRSGDGLLNHAVKMFDALSKEGLTHEALELFGQIKDK 360
            AIE P+DPK+LQEIFH M++ +G +N AVKMFDALSK+G THEALELF QIKDK
Sbjct: 150 LAIEGPEDPKNLQEIFHKMKT-EGFMNEAVKMFDALSKDGRTHEALELFSQIKDK 203