BLASTX nr result

ID: Glycyrrhiza24_contig00028243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028243
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546575.1| PREDICTED: protein MEI2-like 2-like [Glycine...   250   1e-64
ref|XP_003533847.1| PREDICTED: protein MEI2-like 2-like [Glycine...   246   2e-63
ref|XP_003595582.1| Polyadenylate-binding protein [Medicago trun...   224   7e-57
ref|XP_003595581.1| Polyadenylate-binding protein [Medicago trun...   224   7e-57
ref|XP_002271605.1| PREDICTED: protein MEI2-like 2-like [Vitis v...   160   8e-38

>ref|XP_003546575.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
          Length = 862

 Score =  250 bits (638), Expect = 1e-64
 Identities = 125/162 (77%), Positives = 134/162 (82%)
 Frame = +3

Query: 3   WLQFSSPVEQNSLQTISHSPASRIMSPTTGNHLPGLASILQPQVTNTVKAATIGKDLGRS 182
           WLQF+SPVEQNS+QTI++SP SRI+SPTTGNHLPGLASILQPQV+NTVKAA IG DL RS
Sbjct: 391 WLQFNSPVEQNSMQTINYSPGSRIISPTTGNHLPGLASILQPQVSNTVKAAAIGNDLERS 450

Query: 183 SHGEHIFTGMNSSPGATFQSHSLPEPKFSQYRGALXXXXXXXXXXXXXXXXXXXPQFLWG 362
           S GEHIFTGMNSS GATFQSHSLPEPKFSQYRGAL                   PQFLWG
Sbjct: 451 SQGEHIFTGMNSSHGATFQSHSLPEPKFSQYRGAL-SSIGPSTSNGSSVETLSGPQFLWG 509

Query: 363 SPSLYSEHTKPSAWPRPSVGNLFTSNGKSHAFPYSSQNSSFV 488
           SP+LYSEHTKPSAWPR SVG+ F SNGKSHAFPYS+QNSSFV
Sbjct: 510 SPTLYSEHTKPSAWPRSSVGHPFASNGKSHAFPYSTQNSSFV 551


>ref|XP_003533847.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
          Length = 862

 Score =  246 bits (627), Expect = 2e-63
 Identities = 124/163 (76%), Positives = 133/163 (81%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   WLQFSSPVEQNSLQTISHSPASRIMSPTTGNHLPGLASILQPQVTNTVKAATIGKDLGRS 182
           WLQF+SPVEQNS+QTI+HSP SRI+SPTTGNHLPGLASILQPQV+N VKAA IG DLGRS
Sbjct: 391 WLQFNSPVEQNSMQTINHSPGSRIISPTTGNHLPGLASILQPQVSNAVKAAAIGNDLGRS 450

Query: 183 SHGEHIFTGMNSSPGATFQSHSLPEPKFSQYRGALXXXXXXXXXXXXXXXXXXXPQFLWG 362
           S GEHIF+GMNSS GATFQSHSLPEPKFSQYRGAL                   PQFLWG
Sbjct: 451 SQGEHIFSGMNSSHGATFQSHSLPEPKFSQYRGAL-SSIGPSTSNGSSVETLSGPQFLWG 509

Query: 363 SPSLYSEHTKPSAWPRPSVGNLF-TSNGKSHAFPYSSQNSSFV 488
           SP+LYSEHTKPS WPR SVG+ F  SNGKSHAFPYS+QNSSFV
Sbjct: 510 SPTLYSEHTKPSVWPRSSVGHPFAASNGKSHAFPYSTQNSSFV 552


>ref|XP_003595582.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|355484630|gb|AES65833.1| Polyadenylate-binding
           protein [Medicago truncatula]
          Length = 764

 Score =  224 bits (570), Expect = 7e-57
 Identities = 113/164 (68%), Positives = 128/164 (78%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3   WLQFSSPVEQNSLQTISHSPASRIMSPTTGNHLPGLASILQPQVTNTVKAATIGKDLGRS 182
           WLQF+SP+EQ+SL  ++HSP S+IMSPTT NHLPGLASILQPQ++NTVKAATIG+D+GRS
Sbjct: 292 WLQFNSPIEQSSLPNLNHSPGSKIMSPTTSNHLPGLASILQPQLSNTVKAATIGQDIGRS 351

Query: 183 SHGEHIFTGMNSSPGATFQSHSLPEPKFSQYRGALXXXXXXXXXXXXXXXXXXXPQFLWG 362
           SHG+HIF    SS G+ F SHSLPEPKFS YRGAL                   PQFLWG
Sbjct: 352 SHGDHIFPNKISSAGSNFNSHSLPEPKFSPYRGAL-SSFGASTSNGSSVETLTAPQFLWG 410

Query: 363 SPSLYSEHTKPSAWPRPSVGN-LFTSNGKSHAFPYSSQNSSFVS 491
           SP+L SE TKPSAWPRPSVG+ L TSNG SHAFPYSSQN+SFVS
Sbjct: 411 SPNLSSEPTKPSAWPRPSVGHQLSTSNGTSHAFPYSSQNNSFVS 454


>ref|XP_003595581.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|47834691|gb|AAT38999.1| AML5 [Medicago truncatula]
           gi|87241360|gb|ABD33218.1| RNA-binding region RNP-1 (RNA
           recognition motif); RNA recognition motif 2 [Medicago
           truncatula] gi|355484629|gb|AES65832.1|
           Polyadenylate-binding protein [Medicago truncatula]
          Length = 865

 Score =  224 bits (570), Expect = 7e-57
 Identities = 113/164 (68%), Positives = 128/164 (78%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3   WLQFSSPVEQNSLQTISHSPASRIMSPTTGNHLPGLASILQPQVTNTVKAATIGKDLGRS 182
           WLQF+SP+EQ+SL  ++HSP S+IMSPTT NHLPGLASILQPQ++NTVKAATIG+D+GRS
Sbjct: 393 WLQFNSPIEQSSLPNLNHSPGSKIMSPTTSNHLPGLASILQPQLSNTVKAATIGQDIGRS 452

Query: 183 SHGEHIFTGMNSSPGATFQSHSLPEPKFSQYRGALXXXXXXXXXXXXXXXXXXXPQFLWG 362
           SHG+HIF    SS G+ F SHSLPEPKFS YRGAL                   PQFLWG
Sbjct: 453 SHGDHIFPNKISSAGSNFNSHSLPEPKFSPYRGAL-SSFGASTSNGSSVETLTAPQFLWG 511

Query: 363 SPSLYSEHTKPSAWPRPSVGN-LFTSNGKSHAFPYSSQNSSFVS 491
           SP+L SE TKPSAWPRPSVG+ L TSNG SHAFPYSSQN+SFVS
Sbjct: 512 SPNLSSEPTKPSAWPRPSVGHQLSTSNGTSHAFPYSSQNNSFVS 555


>ref|XP_002271605.1| PREDICTED: protein MEI2-like 2-like [Vitis vinifera]
          Length = 860

 Score =  160 bits (406), Expect = 8e-38
 Identities = 83/163 (50%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   WLQFSSPVEQNSLQTISHSPASRIMSPTTGNHLPGLASILQPQVTNTVKAATIGKDLGRS 182
           W QFSSP+E + LQ++S SP  R +SPTT NHLPGLASIL  Q++N+VK A IGKD GR 
Sbjct: 389 WAQFSSPIEHSPLQSLSKSPGFRTVSPTTSNHLPGLASILNSQISNSVKVAPIGKDQGRG 448

Query: 183 SHGEHIFTGMNSSPGATF-QSHSLPEPKFSQYRGALXXXXXXXXXXXXXXXXXXXPQFLW 359
            H E+IF   NS+ G  F QSHS  EP    Y G                     PQFLW
Sbjct: 449 IHVENIFNNTNSNHGTAFQQSHSFSEPNLGPYPGN-GSSFGASTSNGSGIETLSGPQFLW 507

Query: 360 GSPSLYSEHTKPSAWPRPSVGNLFTSNGKSHAFPYSSQNSSFV 488
           GSP+ YSEHT  SAW  PS+G+ F SNG+   FPYS ++ SF+
Sbjct: 508 GSPAPYSEHTNSSAWQPPSMGHPFASNGQGRGFPYSGRHGSFL 550


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