BLASTX nr result

ID: Glycyrrhiza24_contig00028240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028240
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236806.1| Dof22 [Glycine max] gi|112363400|gb|ABI16024...   132   6e-29
ref|NP_001236530.1| Dof4 [Glycine max] gi|112363362|gb|ABI16005....    82   6e-14
ref|XP_003524495.1| PREDICTED: dof zinc finger protein DOF5.4-li...    80   4e-13
dbj|BAC81663.1| DNA binding with one finger 6 protein [Pisum sat...    74   2e-11
gb|ADL36680.1| DOF domain class transcription factor [Malus x do...    66   4e-09

>ref|NP_001236806.1| Dof22 [Glycine max] gi|112363400|gb|ABI16024.1| Dof22 [Glycine max]
          Length = 341

 Score =  132 bits (331), Expect = 6e-29
 Identities = 78/129 (60%), Positives = 84/129 (65%), Gaps = 17/129 (13%)
 Frame = +3

Query: 3   NDALPFGFGNNNH---VLDASSFRFGVT-RQQHENDQLQVVTGNG-----TLGQCHEEFA 155
           N AL FGFGNNN    +LDA+SFRFGV+    H NDQ+    G G        Q H EF 
Sbjct: 212 NQALGFGFGNNNSNISILDATSFRFGVSVTNPHGNDQVLAAPGGGHGQWQQQQQNHHEFG 271

Query: 156 TASFLDRAVPLEFFSSLQNKAAHGGGFGPLD------QSLFDLPNTVDQPYWT-HGHWSG 314
           TASFLD  VPLEF SSLQ+KA H GGFGPLD      Q LFDLPNTVDQPYWT H HWS 
Sbjct: 272 TASFLDHTVPLEF-SSLQHKAGHQGGFGPLDWQPGGDQGLFDLPNTVDQPYWTHHTHWSD 330

Query: 315 HHNP-TLFH 338
             NP +LFH
Sbjct: 331 QDNPSSLFH 339


>ref|NP_001236530.1| Dof4 [Glycine max] gi|112363362|gb|ABI16005.1| Dof4 [Glycine max]
          Length = 300

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 51/120 (42%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
 Frame = +3

Query: 3   NDALPFGFGNNNHVL-DASSFRFGVTRQQHENDQLQVVTGNGTLGQCHEEFATASFLDRA 179
           N+ L  GFG  N  L DASSF++   +    N++L++                 SFLD  
Sbjct: 196 NEPLGSGFGFGNSTLPDASSFQWHYQKVSSNNEELKLPEN--------------SFLDHT 241

Query: 180 VPLEFFSSLQNKAAHGGGFGPLD------QSLFDLPNTVDQPYWTHGHWSGHHN-PTLFH 338
           V L   S + +K +HGGGFG LD      Q LFDLPNTVD  YW+H HWS H N  +LFH
Sbjct: 242 VDL---SGMHSKTSHGGGFGSLDWQGGADQGLFDLPNTVDHAYWSHTHWSDHDNSSSLFH 298


>ref|XP_003524495.1| PREDICTED: dof zinc finger protein DOF5.4-like [Glycine max]
          Length = 292

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 49/119 (41%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
 Frame = +3

Query: 3   NDALPFGFGNNNHVLDASSFRFGVTR-QQHENDQLQVVTGNGTLGQCHEEFATASFLDRA 179
           N+ L FGFGN+  + DASSF++   +     N++L++                +S LD  
Sbjct: 193 NEPLAFGFGNST-LPDASSFQWLHQKVSSSSNEELKL--------------PESSLLDHT 237

Query: 180 VPLEFFSSLQNKAAHGGGFGPL------DQSLFDLPNTVDQPYWTHGHWSGHHNPTLFH 338
           V         +K +HGGGFG L      DQ LFDLPNTVD  YW+H HWS H N TLFH
Sbjct: 238 V------DFHSKISHGGGFGSLDWQGGADQGLFDLPNTVDHAYWSHTHWSDHDNSTLFH 290


>dbj|BAC81663.1| DNA binding with one finger 6 protein [Pisum sativum]
          Length = 230

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 49/123 (39%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
 Frame = +3

Query: 3   NDALPFGFGNNNHVLDASSFRFGVTRQ---QHENDQLQVVTGNGTLGQCHEEFATASFLD 173
           NDA  FG    N+++DASSF FG   Q   QH NDQ+ V     +    H+         
Sbjct: 130 NDAFLFG----NNIIDASSFGFGFNHQHQRQHGNDQVHVAQQQNS----HQRL------- 174

Query: 174 RAVPLEFFSSLQNKAAHGGGFGPLD------QSLFDLPNTVDQPYWTHGHWSGHH--NPT 329
                    SL ++     GFG LD        LFD+PNTV QPYWTH HWS HH    +
Sbjct: 175 ---------SLLHQQQLSNGFGSLDWEASAGNCLFDVPNTVGQPYWTHSHWSDHHVNQSS 225

Query: 330 LFH 338
           LFH
Sbjct: 226 LFH 228


>gb|ADL36680.1| DOF domain class transcription factor [Malus x domestica]
          Length = 520

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 45/119 (37%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
 Frame = +3

Query: 12  LPFGFGNNNHVLDASSFRFGVTRQQHENDQL-QVVTGNGTLGQCHEEFATASFLDRAVPL 188
           +PF FGN N     S F     +  H+++Q+ Q   G    G   +E +    LD+   +
Sbjct: 411 MPFSFGNIN----GSPFN---QQGNHDHNQVHQTQWGQQNQGVKMQEIS-GGLLDQTAQV 462

Query: 189 EFFSSLQNKA-AHGGGFGPLD-------QSLFDLPNTVDQPYWTHGHWSGHHNPTLFHP 341
           +  S  QN++   GGGFG LD       Q LFDLPNTVDQ YW+H  W+   +PTL+ P
Sbjct: 463 DL-SVFQNRSHVGGGGFGSLDWQPGSGDQGLFDLPNTVDQAYWSHSQWTDQDHPTLYLP 520


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