BLASTX nr result

ID: Glycyrrhiza24_contig00028233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028233
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534559.1| PREDICTED: SKP1-like protein 21-like [Glycin...    77   1e-12
ref|XP_003528850.1| PREDICTED: SKP1-like protein 21-like [Glycin...    77   1e-12
ref|XP_003551663.1| PREDICTED: SKP1-like protein 21-like [Glycin...    75   6e-12
ref|XP_003520975.1| PREDICTED: SKP1-like protein 21-like [Glycin...    72   4e-11

>ref|XP_003534559.1| PREDICTED: SKP1-like protein 21-like [Glycine max]
          Length = 347

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 50/98 (51%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   LLSFINGNDRDXXXXXXXXXXXXXXXXXXXXXX-SSLKEASELNKEEVNDHNIRHQSAES 178
           LLSFINGND D                       SSLKEASE+NK EVN  NIRHQSAE+
Sbjct: 205 LLSFINGNDGDPKGVKTSKNKKKNRRKKEQQQKNSSLKEASEVNKVEVNGQNIRHQSAEA 264

Query: 179 GRIVGTSISHTEEDTFTQKEFXXXXXXXXXXPALKEKI 292
            RI  TS SHT ED F  +EF          PALKEKI
Sbjct: 265 DRIAETSNSHT-EDVFAHREFDDGDIDDGIDPALKEKI 301


>ref|XP_003528850.1| PREDICTED: SKP1-like protein 21-like [Glycine max]
          Length = 347

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 48/99 (48%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
 Frame = +2

Query: 2   LLSFINGNDRDXXXXXXXXXXXXXXXXXXXXXXSSLKEASELNKEEVNDHNIRHQSAESG 181
           LLSFINGND D                      SSLKEASE+NK+EVN H+IRHQS+E+ 
Sbjct: 205 LLSFINGNDGDPKGVKTSKNKKKNRRKKEQQKNSSLKEASEMNKKEVNGHDIRHQSSEAE 264

Query: 182 RIVGTS-ISHTEEDTFTQK-EFXXXXXXXXXXPALKEKI 292
           RI  TS + + E+DTF+ K EF          PALKEKI
Sbjct: 265 RISETSYLPYAEDDTFSPKVEFDDGDIDDEIDPALKEKI 303


>ref|XP_003551663.1| PREDICTED: SKP1-like protein 21-like [Glycine max]
          Length = 383

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 49/98 (50%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   LLSFINGNDRDXXXXXXXXXXXXXXXXXXXXXX-SSLKEASELNKEEVNDHNIRHQSAES 178
           LLSFINGND D                       SSLKEASE+NK EVN  +IRHQSAE+
Sbjct: 205 LLSFINGNDGDPKEVKTSKNKKKNRRKKEQQQKNSSLKEASEVNKVEVNGQSIRHQSAEA 264

Query: 179 GRIVGTSISHTEEDTFTQKEFXXXXXXXXXXPALKEKI 292
            RI  TS SHT ED F  +EF          PALKEKI
Sbjct: 265 DRIAETSNSHT-EDVFAHREFDDGDIDDGIDPALKEKI 301


>ref|XP_003520975.1| PREDICTED: SKP1-like protein 21-like [Glycine max]
          Length = 347

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 46/99 (46%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
 Frame = +2

Query: 2   LLSFINGNDRDXXXXXXXXXXXXXXXXXXXXXXSSLKEASELNKEEVNDHNIRHQSAESG 181
           LLSFINGND D                      SSLKE SELNK+EVN H+IRHQS+E+ 
Sbjct: 205 LLSFINGNDGDPKGVKTSKNKKKNRRKKEQQKSSSLKEESELNKKEVNGHDIRHQSSEAE 264

Query: 182 RIVGT-SISHTEEDTFTQK-EFXXXXXXXXXXPALKEKI 292
           RI  T  + + ++DTF+ K EF          PALKEKI
Sbjct: 265 RISETLYLPYADDDTFSPKVEFDDGDIDDEIDPALKEKI 303


Top