BLASTX nr result

ID: Glycyrrhiza24_contig00028222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028222
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612797.1| Cellulose synthase-like protein [Medicago tr...   196   2e-48
ref|XP_003533446.1| PREDICTED: cellulose synthase-like protein D...   196   2e-48
ref|XP_003517664.1| PREDICTED: cellulose synthase-like protein D...   196   2e-48
ref|XP_003557145.1| PREDICTED: cellulose synthase-like protein D...   181   7e-44
dbj|BAJ93918.1| predicted protein [Hordeum vulgare subsp. vulgar...   178   5e-43

>ref|XP_003612797.1| Cellulose synthase-like protein [Medicago truncatula]
            gi|355514132|gb|AES95755.1| Cellulose synthase-like
            protein [Medicago truncatula]
          Length = 1121

 Score =  196 bits (498), Expect = 2e-48
 Identities = 95/103 (92%), Positives = 101/103 (98%)
 Frame = +3

Query: 3    VIQGLLKVMAGIEISFNLTSKSSGDDENDEYADLYVIKWSSLMIPPLTIMMVNLIAIAVA 182
            V+QGLLKV+AGIEISF LTSKSSGDDENDEYADLY+IKWSSLMIPPLTIMMVNLIAIA A
Sbjct: 981  VLQGLLKVIAGIEISFTLTSKSSGDDENDEYADLYIIKWSSLMIPPLTIMMVNLIAIATA 1040

Query: 183  VTRTIYSEDREWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRT 311
            V+RTIYS+DR+WSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRT
Sbjct: 1041 VSRTIYSDDRQWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRT 1083


>ref|XP_003533446.1| PREDICTED: cellulose synthase-like protein D3-like [Glycine max]
          Length = 1117

 Score =  196 bits (497), Expect = 2e-48
 Identities = 95/103 (92%), Positives = 101/103 (98%)
 Frame = +3

Query: 3    VIQGLLKVMAGIEISFNLTSKSSGDDENDEYADLYVIKWSSLMIPPLTIMMVNLIAIAVA 182
            V+QGLLKVMAGIEISF LTSKS GDDENDE+ADLYVIKW+SLMIPP+TIMMVNLIAIAVA
Sbjct: 977  VLQGLLKVMAGIEISFTLTSKSGGDDENDEFADLYVIKWTSLMIPPITIMMVNLIAIAVA 1036

Query: 183  VTRTIYSEDREWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRT 311
            V+RTIYSEDREWSSLLGGVFFSFWVL+HLYPFAKGLMGRRGRT
Sbjct: 1037 VSRTIYSEDREWSSLLGGVFFSFWVLSHLYPFAKGLMGRRGRT 1079


>ref|XP_003517664.1| PREDICTED: cellulose synthase-like protein D3-like [Glycine max]
          Length = 1118

 Score =  196 bits (497), Expect = 2e-48
 Identities = 95/103 (92%), Positives = 101/103 (98%)
 Frame = +3

Query: 3    VIQGLLKVMAGIEISFNLTSKSSGDDENDEYADLYVIKWSSLMIPPLTIMMVNLIAIAVA 182
            V+QGLLKVMAGIEISF LTSKS GDDENDE+ADLYVIKW+SLMIPP+TIMMVNLIAIAVA
Sbjct: 978  VLQGLLKVMAGIEISFTLTSKSGGDDENDEFADLYVIKWTSLMIPPITIMMVNLIAIAVA 1037

Query: 183  VTRTIYSEDREWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRT 311
            V+RTIYSEDREWSSLLGGVFFSFWVL+HLYPFAKGLMGRRGRT
Sbjct: 1038 VSRTIYSEDREWSSLLGGVFFSFWVLSHLYPFAKGLMGRRGRT 1080


>ref|XP_003557145.1| PREDICTED: cellulose synthase-like protein D2-like [Brachypodium
            distachyon]
          Length = 1182

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/103 (83%), Positives = 95/103 (92%)
 Frame = +3

Query: 3    VIQGLLKVMAGIEISFNLTSKSSGDDENDEYADLYVIKWSSLMIPPLTIMMVNLIAIAVA 182
            V+QGLLKV+AGIEISF LTSKS GDDEND+YADLY++KW+SLMIPP+ IMMVNLIAIAV 
Sbjct: 1042 VLQGLLKVIAGIEISFTLTSKSGGDDENDDYADLYIVKWTSLMIPPIVIMMVNLIAIAVG 1101

Query: 183  VTRTIYSEDREWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRT 311
             +RTIYSE  +WS LLGGVFFSFWVLAHLYPFAKGLMGRRGRT
Sbjct: 1102 FSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRT 1144


>dbj|BAJ93918.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326502396|dbj|BAJ95261.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 1188

 Score =  178 bits (451), Expect = 5e-43
 Identities = 85/103 (82%), Positives = 94/103 (91%)
 Frame = +3

Query: 3    VIQGLLKVMAGIEISFNLTSKSSGDDENDEYADLYVIKWSSLMIPPLTIMMVNLIAIAVA 182
            V+QGLLKV+AGIEISF LTSKS  DDENDE+ADLY++KW+SLMIPP+ IMMVNLIAIAV 
Sbjct: 1048 VLQGLLKVIAGIEISFTLTSKSGADDENDEFADLYIVKWTSLMIPPIVIMMVNLIAIAVG 1107

Query: 183  VTRTIYSEDREWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRT 311
             +RTIYSE  +WS LLGGVFFSFWVLAHLYPFAKGLMGRRGRT
Sbjct: 1108 FSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRT 1150


Top