BLASTX nr result

ID: Glycyrrhiza24_contig00028211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028211
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240968.1| uncharacterized protein LOC100799626 [Glycin...   173   1e-41
ref|XP_002515051.1| conserved hypothetical protein [Ricinus comm...   108   3e-22
ref|XP_002334268.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
ref|NP_001241263.1| uncharacterized protein LOC100811452 [Glycin...    92   6e-17
ref|NP_001241461.1| uncharacterized protein LOC100789215 [Glycin...    90   2e-16

>ref|NP_001240968.1| uncharacterized protein LOC100799626 [Glycine max]
           gi|307101644|gb|ADN32787.1| sieve element occlusion e
           [Glycine max]
          Length = 703

 Score =  173 bits (438), Expect = 1e-41
 Identities = 83/110 (75%), Positives = 93/110 (84%)
 Frame = +3

Query: 72  MAMVPRKMQSRAIRHIFSASDDTVMIKQIRATHAPIDGHVDVRPLLNVVQDIFQRSAYLI 251
           MAMVPRKMQSR  RHIFSASDDT M K IRATHAP+DGH+ VRPLL+VVQDIF R+A LI
Sbjct: 1   MAMVPRKMQSRPSRHIFSASDDTTMTKNIRATHAPVDGHIGVRPLLHVVQDIFHRAASLI 60

Query: 252 PDTVQGKQAQLGAMKDNAQQSDITDMLDISYHTINKISCEISCKCVGGGD 401
           P  VQGKQ Q+ AMKD+A QSD+ +++DISYHTINKISCEI CKC  GGD
Sbjct: 61  PGIVQGKQVQMDAMKDSAYQSDLANVIDISYHTINKISCEICCKCSSGGD 110


>ref|XP_002515051.1| conserved hypothetical protein [Ricinus communis]
           gi|223546102|gb|EEF47605.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 701

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/111 (51%), Positives = 75/111 (67%)
 Frame = +3

Query: 72  MAMVPRKMQSRAIRHIFSASDDTVMIKQIRATHAPIDGHVDVRPLLNVVQDIFQRSAYLI 251
           MA+VP +   R  RH+FS SDD  M+KQI+ATHAP     DVRPLLNVV+D+FQR+   +
Sbjct: 1   MAVVPHRSNPRGERHMFSTSDDNAMMKQIQATHAPDGREFDVRPLLNVVEDVFQRA---V 57

Query: 252 PDTVQGKQAQLGAMKDNAQQSDITDMLDISYHTINKISCEISCKCVGGGDA 404
           P +     A +   ++   Q+   +MLD+  +TINKISCEI+CKC GGGDA
Sbjct: 58  PPS---GLATIVQPQEKTLQNGFYEMLDLLSYTINKISCEIACKCSGGGDA 105


>ref|XP_002334268.1| predicted protein [Populus trichocarpa] gi|222870817|gb|EEF07948.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  100 bits (250), Expect = 9e-20
 Identities = 61/119 (51%), Positives = 82/119 (68%), Gaps = 8/119 (6%)
 Frame = +3

Query: 72  MAMVPRKMQSRAIRHIFSASDDTVMIKQIRATHAPIDGH---VDVRPLLNVVQDIFQRSA 242
           MA+VP+KM  R  R +FS+SDDT M+KQI+ATHAP DG      V+PLL++V+DIF RS 
Sbjct: 1   MAVVPQKM--RRERSMFSSSDDTAMMKQIQATHAP-DGRGREFSVKPLLHIVEDIFLRST 57

Query: 243 YLIPDTV----QGK-QAQLGAMKDNAQQSDITDMLDISYHTINKISCEISCKCVGGGDA 404
             +  T     QG  QAQL  +++ A Q+   + +++  +TINKISCE+SCKC GGGDA
Sbjct: 58  PALGMTSIVQQQGAHQAQLDELEEKALQNGFHETIEMLSYTINKISCEMSCKCSGGGDA 116


>ref|NP_001241263.1| uncharacterized protein LOC100811452 [Glycine max]
           gi|307101640|gb|ADN32785.1| sieve element occlusion c
           [Glycine max]
          Length = 698

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 51/107 (47%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
 Frame = +3

Query: 90  KMQSRAIRHIFSASDDTVMIKQIRATHAPIDGHVDVRPLLNVVQDIFQRSAYLIPDTVQG 269
           KMQ R  R +FS SDD+ M KQ+ ATHAP    +DV+P+L +V +I  R    I  TV+G
Sbjct: 8   KMQQRRERRMFSTSDDSAMTKQVEATHAPDGREIDVKPILQIVDEILVR---FIARTVEG 64

Query: 270 KQAQ--LGAMKDNAQQSDITDMLDISYHTINKISCEISCKCVGGGDA 404
            + +    A++  A  ++  DMLD   + INKISCE+SCKC GGGDA
Sbjct: 65  HEVKRDQDALEMTAALAEF-DMLDSLAYIINKISCELSCKCSGGGDA 110


>ref|NP_001241461.1| uncharacterized protein LOC100789215 [Glycine max]
           gi|307101642|gb|ADN32786.1| sieve element occlusion d
           [Glycine max]
          Length = 705

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/107 (47%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
 Frame = +3

Query: 90  KMQSRAIRHIFSASDDTVMIKQIRATHAPIDGHVDVRPLLNVVQDIFQRSAYLIPDTVQG 269
           KMQ R  R  FS SDD+ M KQ++ATHAP    +DV+P+L +V +I  R    I  TV+G
Sbjct: 15  KMQQRKERQRFSTSDDSAMTKQVQATHAPDGREIDVKPILQIVDEILVR---FIARTVEG 71

Query: 270 KQAQ--LGAMKDNAQQSDITDMLDISYHTINKISCEISCKCVGGGDA 404
            + +    A++  A  ++  DMLD   + INKISCE+SCKC GGGDA
Sbjct: 72  YEVKRDQDALEMTAALAEF-DMLDSLAYIINKISCELSCKCSGGGDA 117


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