BLASTX nr result

ID: Glycyrrhiza24_contig00028207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028207
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526705.1| PREDICTED: putative RING-H2 finger protein A...   128   6e-28
gb|ACU24071.1| unknown [Glycine max]                                  125   3e-27
ref|XP_003602221.1| RING finger protein [Medicago truncatula] gi...   114   6e-24
ref|XP_002513558.1| ring finger protein, putative [Ricinus commu...   109   2e-22
ref|XP_002267722.2| PREDICTED: uncharacterized protein LOC100262...   105   4e-21

>ref|XP_003526705.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Glycine
           max]
          Length = 385

 Score =  128 bits (321), Expect = 6e-28
 Identities = 57/67 (85%), Positives = 59/67 (88%)
 Frame = -1

Query: 323 LPKADDKTCPICLSEYEPKETVKAIPKCGHCFHAQCIDEWLPLNASCPICRTSPPKLPQP 144
           LPK  DKTC ICLSEY PKETVK IP+CGHCFHAQCIDEWLPLNASCPICRTSP KLPQP
Sbjct: 319 LPKKGDKTCSICLSEYIPKETVKTIPECGHCFHAQCIDEWLPLNASCPICRTSPRKLPQP 378

Query: 143 LARS*PR 123
            ARS P+
Sbjct: 379 RARSSPQ 385


>gb|ACU24071.1| unknown [Glycine max]
          Length = 385

 Score =  125 bits (315), Expect = 3e-27
 Identities = 56/67 (83%), Positives = 58/67 (86%)
 Frame = -1

Query: 323 LPKADDKTCPICLSEYEPKETVKAIPKCGHCFHAQCIDEWLPLNASCPICRTSPPKLPQP 144
           LPK  DKTC ICLSEY PKETVK IP+CGHCFHAQCIDEWLPLNASCPICRT P KLPQP
Sbjct: 319 LPKKGDKTCSICLSEYIPKETVKTIPECGHCFHAQCIDEWLPLNASCPICRTFPRKLPQP 378

Query: 143 LARS*PR 123
            ARS P+
Sbjct: 379 RARSSPQ 385


>ref|XP_003602221.1| RING finger protein [Medicago truncatula]
           gi|355491269|gb|AES72472.1| RING finger protein
           [Medicago truncatula]
          Length = 388

 Score =  114 bits (286), Expect = 6e-24
 Identities = 48/57 (84%), Positives = 52/57 (91%)
 Frame = -1

Query: 323 LPKADDKTCPICLSEYEPKETVKAIPKCGHCFHAQCIDEWLPLNASCPICRTSPPKL 153
           LPK + KTCPICLSEY PKETVK +P+C HCFHAQCIDEWLPLNASCPICRTSPP+L
Sbjct: 323 LPKPNGKTCPICLSEYMPKETVKTMPECEHCFHAQCIDEWLPLNASCPICRTSPPRL 379


>ref|XP_002513558.1| ring finger protein, putative [Ricinus communis]
           gi|223547466|gb|EEF48961.1| ring finger protein,
           putative [Ricinus communis]
          Length = 377

 Score =  109 bits (273), Expect = 2e-22
 Identities = 47/63 (74%), Positives = 52/63 (82%)
 Frame = -1

Query: 323 LPKADDKTCPICLSEYEPKETVKAIPKCGHCFHAQCIDEWLPLNASCPICRTSPPKLPQP 144
           LPK DD TC ICLSEY+PKET+K IP+C HCFHA CIDEWL LNASCPICR SP +LP P
Sbjct: 313 LPKPDDITCSICLSEYKPKETLKTIPECQHCFHADCIDEWLKLNASCPICRKSPDRLPPP 372

Query: 143 LAR 135
            A+
Sbjct: 373 PAQ 375


>ref|XP_002267722.2| PREDICTED: uncharacterized protein LOC100262465 [Vitis vinifera]
          Length = 1054

 Score =  105 bits (262), Expect = 4e-21
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = -1

Query: 323 LPKADDKTCPICLSEYEPKETVKAIPKCGHCFHAQCIDEWLPLNASCPICRTSPPKLP 150
           LPK DD TC ICLSEY PKET+K IP+C HCFH++CIDEWL LNASCPICR SP K P
Sbjct: 284 LPKPDDNTCSICLSEYRPKETLKIIPECQHCFHSECIDEWLHLNASCPICRNSPAKSP 341


Top