BLASTX nr result

ID: Glycyrrhiza24_contig00028203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028203
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532566.1| conserved hypothetical protein [Ricinus comm...    58   9e-07
ref|XP_003596984.1| Rhomboid family member [Medicago truncatula]...    56   3e-06
emb|CAN68680.1| hypothetical protein VITISV_041943 [Vitis vinifera]    54   1e-05

>ref|XP_002532566.1| conserved hypothetical protein [Ricinus communis]
           gi|223527721|gb|EEF29827.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 122

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/91 (40%), Positives = 49/91 (53%)
 Frame = +1

Query: 91  SHAHNRYLRPGALAKLRDSKITSSRSHLSLMISLNSNSHPLLPPTPQNDQQQHSPINHDD 270
           S  + RYL+PGALA+LR+SKI S+RSH   +  ++  +HP+   +P      H  I+  D
Sbjct: 10  SECYYRYLKPGALAQLRNSKI-SARSHNKPISIISLINHPVDESSPP-PMTTHHQISVGD 67

Query: 271 GVPCFAPTTASFITRPHCLTRKKLFAVTPVF 363
           G     P   S    P CL RKKL A   VF
Sbjct: 68  GEQVVVPCLVSKTYGPRCLKRKKLMAARSVF 98


>ref|XP_003596984.1| Rhomboid family member [Medicago truncatula]
           gi|355486032|gb|AES67235.1| Rhomboid family member
           [Medicago truncatula]
          Length = 221

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/91 (38%), Positives = 46/91 (50%)
 Frame = +1

Query: 91  SHAHNRYLRPGALAKLRDSKITSSRSHLSLMISLNSNSHPLLPPTPQNDQQQHSPINHDD 270
           +H H ++L+PG LA+LRDSKIT+    L+ +  ++    P  PP P    Q  +     D
Sbjct: 11  NHFH-KFLKPGTLARLRDSKITARSHRLNSLSQISIYRPPASPPPPPPSDQPQTTAVSAD 69

Query: 271 GVPCFAPTTASFITRPHCLTRKKLFAVTPVF 363
           G P F     S I  P C  RKKL A   VF
Sbjct: 70  GFPSF----FSGIYGPRCPQRKKLVAAKSVF 96


>emb|CAN68680.1| hypothetical protein VITISV_041943 [Vitis vinifera]
          Length = 124

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 43/101 (42%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
 Frame = +1

Query: 70  KSSYKFRSHAHNRYLRPGALAKLRDSKITSSRSH---LSLMISLNSNSHPLLPPTPQNDQ 240
           +SS K R  A +RYL+PGALA+LRDS+I S+RSH       I L+  S P   P P    
Sbjct: 10  RSSSK-RDEAFHRYLKPGALAQLRDSRI-SARSHRVDSHSQIHLHRTSSPPSSPLPP--- 64

Query: 241 QQHSPINHDDGVPCFAPTTASFITRPHCLTRKKLFAVTPVF 363
                    D  PCFA         P CL RKKL A   VF
Sbjct: 65  -------QIDAFPCFAGRNYG----PRCLQRKKLVAAKSVF 94


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