BLASTX nr result

ID: Glycyrrhiza24_contig00028194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028194
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [...   171   7e-41
ref|XP_002523081.1| ATP-dependent RNA helicase, putative [Ricinu...   159   2e-37
ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containin...   158   5e-37
emb|CBI36846.3| unnamed protein product [Vitis vinifera]              158   5e-37
ref|XP_004172705.1| PREDICTED: zinc finger CCCH domain-containin...   154   6e-36

>ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355480579|gb|AES61782.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 1035

 Score =  171 bits (432), Expect = 7e-41
 Identities = 81/106 (76%), Positives = 93/106 (87%)
 Frame = -1

Query: 320 HLPVMSLRKKIVEKIQENRVTLIIGETGCGKSSQVPQFLLEENMSPILCTLPRRFXXXXX 141
           HLPVMS+RKKI++KIQ+NRVTLIIGETGCGKSSQ+PQFLLEENM+PILCTLPRRF     
Sbjct: 29  HLPVMSMRKKIIDKIQQNRVTLIIGETGCGKSSQIPQFLLEENMTPILCTLPRRFAVVSV 88

Query: 140 XXXXXXARNCELGEEVGYHIGHSKHLSAGSKIIFKTAGVLLDELRE 3
                 ARNC+LGEEVGYHIGHS+H SA S+I+FKTAGVLLDE++E
Sbjct: 89  AKMVAKARNCQLGEEVGYHIGHSRHFSASSEIVFKTAGVLLDEMQE 134


>ref|XP_002523081.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223537643|gb|EEF39266.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1025

 Score =  159 bits (402), Expect = 2e-37
 Identities = 79/105 (75%), Positives = 86/105 (81%)
 Frame = -1

Query: 317 LPVMSLRKKIVEKIQENRVTLIIGETGCGKSSQVPQFLLEENMSPILCTLPRRFXXXXXX 138
           LP+MSLR+KIVEK+ ENRVTLI+G+TGCGKSSQVPQFLLEENM PILCT PRRF      
Sbjct: 27  LPIMSLRQKIVEKVLENRVTLIVGDTGCGKSSQVPQFLLEENMEPILCTQPRRFAVVAVA 86

Query: 137 XXXXXARNCELGEEVGYHIGHSKHLSAGSKIIFKTAGVLLDELRE 3
                ARNCELG EVGYHIGH KHLS  SKI+FKTAGVL DE+RE
Sbjct: 87  KMVAKARNCELGGEVGYHIGHLKHLSERSKIVFKTAGVLSDEMRE 131


>ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containing protein 31 [Vitis
           vinifera]
          Length = 1014

 Score =  158 bits (399), Expect = 5e-37
 Identities = 81/105 (77%), Positives = 87/105 (82%)
 Frame = -1

Query: 317 LPVMSLRKKIVEKIQENRVTLIIGETGCGKSSQVPQFLLEENMSPILCTLPRRFXXXXXX 138
           LPVM+LRKKIVEKI ENRVTLI+GETGCGKSSQVPQFLLEENM+PILCT PRRF      
Sbjct: 20  LPVMALRKKIVEKIMENRVTLIVGETGCGKSSQVPQFLLEENMAPILCTQPRRFAVVAVA 79

Query: 137 XXXXXARNCELGEEVGYHIGHSKHLSAGSKIIFKTAGVLLDELRE 3
                ARN E+G EVGYHIGHSK LS  SKI+FKTAGVLLDE+RE
Sbjct: 80  RMVAKARNSEVGGEVGYHIGHSKLLSERSKIVFKTAGVLLDEMRE 124


>emb|CBI36846.3| unnamed protein product [Vitis vinifera]
          Length = 1007

 Score =  158 bits (399), Expect = 5e-37
 Identities = 81/105 (77%), Positives = 87/105 (82%)
 Frame = -1

Query: 317 LPVMSLRKKIVEKIQENRVTLIIGETGCGKSSQVPQFLLEENMSPILCTLPRRFXXXXXX 138
           LPVM+LRKKIVEKI ENRVTLI+GETGCGKSSQVPQFLLEENM+PILCT PRRF      
Sbjct: 20  LPVMALRKKIVEKIMENRVTLIVGETGCGKSSQVPQFLLEENMAPILCTQPRRFAVVAVA 79

Query: 137 XXXXXARNCELGEEVGYHIGHSKHLSAGSKIIFKTAGVLLDELRE 3
                ARN E+G EVGYHIGHSK LS  SKI+FKTAGVLLDE+RE
Sbjct: 80  RMVAKARNSEVGGEVGYHIGHSKLLSERSKIVFKTAGVLLDEMRE 124


>ref|XP_004172705.1| PREDICTED: zinc finger CCCH domain-containing protein 4-like,
           partial [Cucumis sativus]
          Length = 432

 Score =  154 bits (390), Expect = 6e-36
 Identities = 75/105 (71%), Positives = 87/105 (82%)
 Frame = -1

Query: 317 LPVMSLRKKIVEKIQENRVTLIIGETGCGKSSQVPQFLLEENMSPILCTLPRRFXXXXXX 138
           LPVMSLR++IVEKI++NRVTLI+GETGCGKSSQ+PQFLLEE+M PILCT PRRF      
Sbjct: 23  LPVMSLRERIVEKIRQNRVTLIVGETGCGKSSQIPQFLLEEDMGPILCTQPRRFAVVAIA 82

Query: 137 XXXXXARNCELGEEVGYHIGHSKHLSAGSKIIFKTAGVLLDELRE 3
                AR C +GEEVGYHIGHSKH S  SKI+FKTAGVLL+E+R+
Sbjct: 83  NMVARARKCNVGEEVGYHIGHSKHSSEKSKIVFKTAGVLLEEMRD 127


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