BLASTX nr result
ID: Glycyrrhiza24_contig00028188
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00028188 (287 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003528477.1| PREDICTED: glutamate receptor 2.7-like [Glyc... 144 6e-33 ref|XP_003593704.1| Glutamate receptor 2.7 [Medicago truncatula]... 138 5e-31 ref|XP_003541715.1| PREDICTED: glutamate receptor 2.7-like [Glyc... 133 1e-29 ref|XP_003541512.1| PREDICTED: glutamate receptor 2.7-like [Glyc... 130 1e-28 ref|XP_002305094.1| glutamate-gated kainate-type ion channel rec... 120 2e-25 >ref|XP_003528477.1| PREDICTED: glutamate receptor 2.7-like [Glycine max] Length = 1033 Score = 144 bits (364), Expect = 6e-33 Identities = 67/95 (70%), Positives = 80/95 (84%) Frame = +2 Query: 2 QKPLRIAVPGRTQFSKFVKVDYDEHGKINKYSGFCIEIFDKVLELLEYDLPFEYYPFNGS 181 QKP++IAVPGRT FS+FVKVD DE KYSGFCIEIF+KVL++L YDLP+E++P NG+ Sbjct: 579 QKPMQIAVPGRTSFSRFVKVDRDELTNSYKYSGFCIEIFEKVLDILGYDLPYEFHPINGT 638 Query: 182 YPDLVQLVYNKTYDAVVGDVTILAERLDYVDFSVP 286 Y DLVQLVYNKTY+AV+GD TI RL YVDF+VP Sbjct: 639 YSDLVQLVYNKTYEAVIGDTTITEARLQYVDFTVP 673 >ref|XP_003593704.1| Glutamate receptor 2.7 [Medicago truncatula] gi|355482752|gb|AES63955.1| Glutamate receptor 2.7 [Medicago truncatula] Length = 1083 Score = 138 bits (347), Expect = 5e-31 Identities = 65/95 (68%), Positives = 79/95 (83%) Frame = +2 Query: 2 QKPLRIAVPGRTQFSKFVKVDYDEHGKINKYSGFCIEIFDKVLELLEYDLPFEYYPFNGS 181 + PLRIAV RT FS+FVKV Y ++G+ +KY+GFCIEIF+ VL L YDLP+ YYP +G+ Sbjct: 457 KNPLRIAVRSRTSFSRFVKVVYGQNGEPDKYTGFCIEIFEHVLNHLGYDLPYSYYPIDGT 516 Query: 182 YPDLVQLVYNKTYDAVVGDVTILAERLDYVDFSVP 286 Y DLVQLVYNKTYDAVVGD+TI+ ERL YVDF+VP Sbjct: 517 YNDLVQLVYNKTYDAVVGDMTIIEERLPYVDFTVP 551 >ref|XP_003541715.1| PREDICTED: glutamate receptor 2.7-like [Glycine max] Length = 910 Score = 133 bits (335), Expect = 1e-29 Identities = 67/95 (70%), Positives = 78/95 (82%) Frame = +2 Query: 2 QKPLRIAVPGRTQFSKFVKVDYDEHGKINKYSGFCIEIFDKVLELLEYDLPFEYYPFNGS 181 Q PLRIAV RT FSKFV +YD++ KI YSGFCI+IF VL LL YDLP++YYP +G+ Sbjct: 426 QNPLRIAVRNRTSFSKFV--NYDQNKKI--YSGFCIDIFQSVLPLLGYDLPYQYYPIDGT 481 Query: 182 YPDLVQLVYNKTYDAVVGDVTILAERLDYVDFSVP 286 Y DLVQLVYNKTYDAVVGD+TIL ER+ YVDF+VP Sbjct: 482 YNDLVQLVYNKTYDAVVGDMTILEERMQYVDFTVP 516 >ref|XP_003541512.1| PREDICTED: glutamate receptor 2.7-like [Glycine max] Length = 816 Score = 130 bits (326), Expect = 1e-28 Identities = 59/93 (63%), Positives = 75/93 (80%) Frame = +2 Query: 2 QKPLRIAVPGRTQFSKFVKVDYDEHGKINKYSGFCIEIFDKVLELLEYDLPFEYYPFNGS 181 Q P++IAVPGRT F FVKVD DEH K++GFCIE+F+KV+ +L+YDLP E++P NG+ Sbjct: 410 QNPMQIAVPGRTSFPAFVKVDPDEHHNSYKFNGFCIELFNKVIGILKYDLPHEFHPINGT 469 Query: 182 YPDLVQLVYNKTYDAVVGDVTILAERLDYVDFS 280 Y DLVQLVYNK+Y A +GDVTI +RL YVDF+ Sbjct: 470 YNDLVQLVYNKSYAAAIGDVTITEDRLKYVDFT 502 >ref|XP_002305094.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] gi|222848058|gb|EEE85605.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] Length = 784 Score = 120 bits (300), Expect = 2e-25 Identities = 58/94 (61%), Positives = 72/94 (76%) Frame = +2 Query: 5 KPLRIAVPGRTQFSKFVKVDYDEHGKINKYSGFCIEIFDKVLELLEYDLPFEYYPFNGSY 184 K + I VPGRT F KFVKV + GK +Y GFCIE+F KV E+L+YDLP+++ PFNG+Y Sbjct: 306 KRMIIGVPGRTSFEKFVKVSTNSAGK-KEYDGFCIELFHKVREVLKYDLPYQFEPFNGTY 364 Query: 185 PDLVQLVYNKTYDAVVGDVTILAERLDYVDFSVP 286 DLV VYNKT+DA+VGDVTILA R D V+F+ P Sbjct: 365 DDLVDHVYNKTFDAIVGDVTILANRSDKVEFTQP 398