BLASTX nr result

ID: Glycyrrhiza24_contig00028188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028188
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528477.1| PREDICTED: glutamate receptor 2.7-like [Glyc...   144   6e-33
ref|XP_003593704.1| Glutamate receptor 2.7 [Medicago truncatula]...   138   5e-31
ref|XP_003541715.1| PREDICTED: glutamate receptor 2.7-like [Glyc...   133   1e-29
ref|XP_003541512.1| PREDICTED: glutamate receptor 2.7-like [Glyc...   130   1e-28
ref|XP_002305094.1| glutamate-gated kainate-type ion channel rec...   120   2e-25

>ref|XP_003528477.1| PREDICTED: glutamate receptor 2.7-like [Glycine max]
          Length = 1033

 Score =  144 bits (364), Expect = 6e-33
 Identities = 67/95 (70%), Positives = 80/95 (84%)
 Frame = +2

Query: 2   QKPLRIAVPGRTQFSKFVKVDYDEHGKINKYSGFCIEIFDKVLELLEYDLPFEYYPFNGS 181
           QKP++IAVPGRT FS+FVKVD DE     KYSGFCIEIF+KVL++L YDLP+E++P NG+
Sbjct: 579 QKPMQIAVPGRTSFSRFVKVDRDELTNSYKYSGFCIEIFEKVLDILGYDLPYEFHPINGT 638

Query: 182 YPDLVQLVYNKTYDAVVGDVTILAERLDYVDFSVP 286
           Y DLVQLVYNKTY+AV+GD TI   RL YVDF+VP
Sbjct: 639 YSDLVQLVYNKTYEAVIGDTTITEARLQYVDFTVP 673


>ref|XP_003593704.1| Glutamate receptor 2.7 [Medicago truncatula]
           gi|355482752|gb|AES63955.1| Glutamate receptor 2.7
           [Medicago truncatula]
          Length = 1083

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/95 (68%), Positives = 79/95 (83%)
 Frame = +2

Query: 2   QKPLRIAVPGRTQFSKFVKVDYDEHGKINKYSGFCIEIFDKVLELLEYDLPFEYYPFNGS 181
           + PLRIAV  RT FS+FVKV Y ++G+ +KY+GFCIEIF+ VL  L YDLP+ YYP +G+
Sbjct: 457 KNPLRIAVRSRTSFSRFVKVVYGQNGEPDKYTGFCIEIFEHVLNHLGYDLPYSYYPIDGT 516

Query: 182 YPDLVQLVYNKTYDAVVGDVTILAERLDYVDFSVP 286
           Y DLVQLVYNKTYDAVVGD+TI+ ERL YVDF+VP
Sbjct: 517 YNDLVQLVYNKTYDAVVGDMTIIEERLPYVDFTVP 551


>ref|XP_003541715.1| PREDICTED: glutamate receptor 2.7-like [Glycine max]
          Length = 910

 Score =  133 bits (335), Expect = 1e-29
 Identities = 67/95 (70%), Positives = 78/95 (82%)
 Frame = +2

Query: 2   QKPLRIAVPGRTQFSKFVKVDYDEHGKINKYSGFCIEIFDKVLELLEYDLPFEYYPFNGS 181
           Q PLRIAV  RT FSKFV  +YD++ KI  YSGFCI+IF  VL LL YDLP++YYP +G+
Sbjct: 426 QNPLRIAVRNRTSFSKFV--NYDQNKKI--YSGFCIDIFQSVLPLLGYDLPYQYYPIDGT 481

Query: 182 YPDLVQLVYNKTYDAVVGDVTILAERLDYVDFSVP 286
           Y DLVQLVYNKTYDAVVGD+TIL ER+ YVDF+VP
Sbjct: 482 YNDLVQLVYNKTYDAVVGDMTILEERMQYVDFTVP 516


>ref|XP_003541512.1| PREDICTED: glutamate receptor 2.7-like [Glycine max]
          Length = 816

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/93 (63%), Positives = 75/93 (80%)
 Frame = +2

Query: 2   QKPLRIAVPGRTQFSKFVKVDYDEHGKINKYSGFCIEIFDKVLELLEYDLPFEYYPFNGS 181
           Q P++IAVPGRT F  FVKVD DEH    K++GFCIE+F+KV+ +L+YDLP E++P NG+
Sbjct: 410 QNPMQIAVPGRTSFPAFVKVDPDEHHNSYKFNGFCIELFNKVIGILKYDLPHEFHPINGT 469

Query: 182 YPDLVQLVYNKTYDAVVGDVTILAERLDYVDFS 280
           Y DLVQLVYNK+Y A +GDVTI  +RL YVDF+
Sbjct: 470 YNDLVQLVYNKSYAAAIGDVTITEDRLKYVDFT 502


>ref|XP_002305094.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848058|gb|EEE85605.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 784

 Score =  120 bits (300), Expect = 2e-25
 Identities = 58/94 (61%), Positives = 72/94 (76%)
 Frame = +2

Query: 5   KPLRIAVPGRTQFSKFVKVDYDEHGKINKYSGFCIEIFDKVLELLEYDLPFEYYPFNGSY 184
           K + I VPGRT F KFVKV  +  GK  +Y GFCIE+F KV E+L+YDLP+++ PFNG+Y
Sbjct: 306 KRMIIGVPGRTSFEKFVKVSTNSAGK-KEYDGFCIELFHKVREVLKYDLPYQFEPFNGTY 364

Query: 185 PDLVQLVYNKTYDAVVGDVTILAERLDYVDFSVP 286
            DLV  VYNKT+DA+VGDVTILA R D V+F+ P
Sbjct: 365 DDLVDHVYNKTFDAIVGDVTILANRSDKVEFTQP 398


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