BLASTX nr result

ID: Glycyrrhiza24_contig00028181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028181
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541035.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-co...   102   3e-20
ref|XP_003556021.1| PREDICTED: WD repeat-containing protein 25-l...    79   3e-13
emb|CBI20464.3| unnamed protein product [Vitis vinifera]               75   6e-12
ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-l...    72   4e-11
ref|XP_003526153.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-co...    56   3e-06

>ref|XP_003541035.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein
           25-like [Glycine max]
          Length = 417

 Score =  102 bits (254), Expect = 3e-20
 Identities = 65/132 (49%), Positives = 72/132 (54%)
 Frame = -2

Query: 396 MDLLCDAYSNASDDNDEFEEQPKRQRLYHXXXXXXXXXXXXXXXXXXXXXXXXXXLIPGS 217
           MDLLC+AYSNASD  DE EE PKRQR+                             +PG 
Sbjct: 1   MDLLCNAYSNASDHEDEEEEPPKRQRV--SLSSPNPLKRHLPLSSHPSFNHQTQAPMPGR 58

Query: 216 YVSKRQRASMCPLPTSLPHHPVPASSSFELSGSISDADIPHRILSLLKGKAKGHQNLNLI 37
           Y+SKRQRA M P          P       S SI DADI H ILSLLK KAKGHQ+ NLI
Sbjct: 59  YISKRQRALMAP----------PLPLFLTRSWSILDADIHHNILSLLKSKAKGHQSPNLI 108

Query: 36  SEKLSATLCGHS 1
           SEKLSA+L GH+
Sbjct: 109 SEKLSASLYGHT 120


>ref|XP_003556021.1| PREDICTED: WD repeat-containing protein 25-like [Glycine max]
          Length = 359

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/59 (72%), Positives = 45/59 (76%)
 Frame = -2

Query: 177 PTSLPHHPVPASSSFELSGSISDADIPHRILSLLKGKAKGHQNLNLISEKLSATLCGHS 1
           P  LP  PVP  S F LSGSI DADI H ILSLLK KAKGHQ+ NLISEKLSATL GH+
Sbjct: 5   PAPLPE-PVPVPSPFTLSGSILDADIHHNILSLLKSKAKGHQSPNLISEKLSATLYGHT 62


>emb|CBI20464.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 52/135 (38%), Positives = 70/135 (51%)
 Frame = -2

Query: 408 PISEMDLLCDAYSNASDDNDEFEEQPKRQRLYHXXXXXXXXXXXXXXXXXXXXXXXXXXL 229
           P S MDLLC+AYS  SDD+D+ E +P  +                              L
Sbjct: 85  PKSAMDLLCNAYSTPSDDDDD-EPRPVAE--------PTPPPLKRFKPQNPPLLPKPYPL 135

Query: 228 IPGSYVSKRQRASMCPLPTSLPHHPVPASSSFELSGSISDADIPHRILSLLKGKAKGHQN 49
           I G Y+SKR+R+ + P  +  P  P PA+S+  + GSISD+D+P  ILS L+ +AKG   
Sbjct: 136 IAGRYISKRERSLLSPALS--PPLPNPAASASPVMGSISDSDLPRDILSSLRHQAKGRSQ 193

Query: 48  LNLISEKLSATLCGH 4
           L  ISE+LS  L  H
Sbjct: 194 LGRISERLSVDLKSH 208


>ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-like [Vitis vinifera]
          Length = 418

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 50/131 (38%), Positives = 68/131 (51%)
 Frame = -2

Query: 396 MDLLCDAYSNASDDNDEFEEQPKRQRLYHXXXXXXXXXXXXXXXXXXXXXXXXXXLIPGS 217
           MDLLC+AYS  SDD+D+ E +P  +                              LI G 
Sbjct: 1   MDLLCNAYSTPSDDDDD-EPRPVAE--------PTPPPLKRFKPQNPPLLPKPYPLIAGR 51

Query: 216 YVSKRQRASMCPLPTSLPHHPVPASSSFELSGSISDADIPHRILSLLKGKAKGHQNLNLI 37
           Y+SKR+R+ + P  +  P  P PA+S+  + GSISD+D+P  ILS L+ +AKG   L  I
Sbjct: 52  YISKRERSLLSPALS--PPLPNPAASASPVMGSISDSDLPRDILSSLRHQAKGRSQLGRI 109

Query: 36  SEKLSATLCGH 4
           SE+LS  L  H
Sbjct: 110 SERLSVDLKSH 120


>ref|XP_003526153.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein
           25-like [Glycine max]
          Length = 350

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/41 (70%), Positives = 31/41 (75%)
 Frame = -2

Query: 123 GSISDADIPHRILSLLKGKAKGHQNLNLISEKLSATLCGHS 1
           GSI DADI H ILSLLK  AKGHQ+  LISEKL  TL GH+
Sbjct: 14  GSILDADIHHNILSLLKSIAKGHQSPTLISEKLXVTLYGHT 54


Top