BLASTX nr result

ID: Glycyrrhiza24_contig00028154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028154
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597877.1| Pentatricopeptide repeat-containing protein ...   217   1e-54
dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]                         214   5e-54
ref|XP_002517613.1| pentatricopeptide repeat-containing protein,...   214   7e-54
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi...   213   1e-53
ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|2...   213   2e-53

>ref|XP_003597877.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87162918|gb|ABD28713.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355486925|gb|AES68128.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 439

 Score =  217 bits (552), Expect = 1e-54
 Identities = 109/153 (71%), Positives = 123/153 (80%)
 Frame = -1

Query: 460 ALDRIKAERDPHKLFQLFRSNATNRFLFENRFAFDDTVSRLAGAKRFDYIEHLLEHQKTL 281
           AL+ +K+E DPHKLF +F+SNATN  + ENRFAF DTVSRLAGAKRFDYIE LLE QK L
Sbjct: 79  ALEALKSEWDPHKLFHIFKSNATNPIVVENRFAFYDTVSRLAGAKRFDYIEQLLEQQKKL 138

Query: 280 PQSRREGFVVRIITLYGKAGMHEHALNTFYQMHSFPCRRTVKSFNATLKVLAQTRNLDSI 101
           PQSRREGFVVRIITLYG AGM +HALNTFYQM  F C RTVKSFNATL VLA++R+ D I
Sbjct: 139 PQSRREGFVVRIITLYGNAGMIQHALNTFYQMGDFRCVRTVKSFNATLNVLAKSRDFDEI 198

Query: 100 LRFLEHANSEFHIQLDIFSVNIVIKAFCEVGKL 2
            RFL      F I+LD++SVNI +KAFCE  KL
Sbjct: 199 SRFLNEVPRRFDIRLDVYSVNIAVKAFCEAEKL 231


>dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]
          Length = 399

 Score =  214 bits (546), Expect = 5e-54
 Identities = 106/153 (69%), Positives = 125/153 (81%)
 Frame = -1

Query: 460 ALDRIKAERDPHKLFQLFRSNATNRFLFENRFAFDDTVSRLAGAKRFDYIEHLLEHQKTL 281
           AL ++KAERDP KLF LF++NA NR + ENRFAF+DTVSRLAGA+RF YIE+LLEHQKTL
Sbjct: 40  ALIKLKAERDPEKLFNLFKANAQNRLVIENRFAFEDTVSRLAGARRFHYIENLLEHQKTL 99

Query: 280 PQSRREGFVVRIITLYGKAGMHEHALNTFYQMHSFPCRRTVKSFNATLKVLAQTRNLDSI 101
           PQ RREGF+VRII LY KAGM +HALNTFY MH + C+RTVKSFNA LKVL  TRN+ +I
Sbjct: 100 PQGRREGFIVRIIMLYAKAGMVKHALNTFYDMHLYGCKRTVKSFNAALKVLTGTRNMVAI 159

Query: 100 LRFLEHANSEFHIQLDIFSVNIVIKAFCEVGKL 2
             FL  A  +F I +DIFS+NI+IKA CE+G L
Sbjct: 160 QDFLCEAPEKFDITMDIFSINIIIKALCEMGYL 192


>ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543245|gb|EEF44777.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 400

 Score =  214 bits (545), Expect = 7e-54
 Identities = 103/153 (67%), Positives = 126/153 (82%)
 Frame = -1

Query: 460 ALDRIKAERDPHKLFQLFRSNATNRFLFENRFAFDDTVSRLAGAKRFDYIEHLLEHQKTL 281
           AL ++KAERDP KLF LF++NA NR + ENRFAF+DT+SRLAGA+RFDYIEHLLEHQKTL
Sbjct: 41  ALAKLKAERDPEKLFNLFKANARNRLVIENRFAFEDTISRLAGARRFDYIEHLLEHQKTL 100

Query: 280 PQSRREGFVVRIITLYGKAGMHEHALNTFYQMHSFPCRRTVKSFNATLKVLAQTRNLDSI 101
           PQ RREGF++RII LYGKAGM +HA++TF  MH + C+RTVKSFNA LKVL +T +L++I
Sbjct: 101 PQGRREGFIIRIIMLYGKAGMTKHAVDTFNDMHMYGCKRTVKSFNAALKVLTETCDLEAI 160

Query: 100 LRFLEHANSEFHIQLDIFSVNIVIKAFCEVGKL 2
             FL     +F I LDIFSVNI+IKAFC++  L
Sbjct: 161 KAFLSEVPEKFDIILDIFSVNIIIKAFCKMSIL 193


>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
           gi|449484169|ref|XP_004156805.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
          Length = 399

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/153 (67%), Positives = 126/153 (82%)
 Frame = -1

Query: 460 ALDRIKAERDPHKLFQLFRSNATNRFLFENRFAFDDTVSRLAGAKRFDYIEHLLEHQKTL 281
           AL ++KAERDP KLF LF++NA NR + ENRFAF+DTVSRLAGA+RFDYIEHLLEHQKTL
Sbjct: 40  ALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTL 99

Query: 280 PQSRREGFVVRIITLYGKAGMHEHALNTFYQMHSFPCRRTVKSFNATLKVLAQTRNLDSI 101
           PQ RREGF++RII LYGKA M +HAL+TFY MH + C RTVKSFNA LKVL ++R+L ++
Sbjct: 100 PQGRREGFIIRIIMLYGKAEMIKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGAL 159

Query: 100 LRFLEHANSEFHIQLDIFSVNIVIKAFCEVGKL 2
             FL  A  +F I+LDI SVNI++KAFC+ G L
Sbjct: 160 EAFLSEAPEKFDIELDIISVNILVKAFCDFGFL 192


>ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|222840687|gb|EEE78234.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  213 bits (542), Expect = 2e-53
 Identities = 105/153 (68%), Positives = 123/153 (80%)
 Frame = -1

Query: 460 ALDRIKAERDPHKLFQLFRSNATNRFLFENRFAFDDTVSRLAGAKRFDYIEHLLEHQKTL 281
           AL ++KAERDP KLF LF++NA NR + ENRFAF+DTVSRLAGA RFDYIEHLLEHQK L
Sbjct: 42  ALVKLKAERDPEKLFNLFKANAENRLVVENRFAFEDTVSRLAGANRFDYIEHLLEHQKPL 101

Query: 280 PQSRREGFVVRIITLYGKAGMHEHALNTFYQMHSFPCRRTVKSFNATLKVLAQTRNLDSI 101
           PQ RREGF+VRII LYGKAGM +HA++TFY MH   C+RTVKS NA LKVL  TR+L +I
Sbjct: 102 PQGRREGFMVRIIMLYGKAGMIKHAIDTFYNMHLHGCKRTVKSVNAALKVLTGTRDLAAI 161

Query: 100 LRFLEHANSEFHIQLDIFSVNIVIKAFCEVGKL 2
             F+  A  +F I+LDIFSVNI++KA CE G L
Sbjct: 162 EAFVNEAPKKFDIELDIFSVNIIVKALCETGNL 194


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