BLASTX nr result

ID: Glycyrrhiza24_contig00028141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028141
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606405.1| DNA polymerase epsilon subunit [Medicago tru...   166   7e-39
ref|NP_001242442.1| uncharacterized protein LOC100793738 [Glycin...   149   9e-34
ref|NP_001236469.1| uncharacterized protein LOC100500588 [Glycin...   127   3e-27
ref|XP_004170032.1| PREDICTED: uncharacterized protein LOC101228...   123   4e-26
ref|XP_004149539.1| PREDICTED: uncharacterized protein LOC101211...   123   4e-26

>ref|XP_003606405.1| DNA polymerase epsilon subunit [Medicago truncatula]
           gi|355507460|gb|AES88602.1| DNA polymerase epsilon
           subunit [Medicago truncatula]
           gi|388523247|gb|AFK49676.1| nuclear transcription factor
           Y subunit C7 [Medicago truncatula]
          Length = 179

 Score =  166 bits (419), Expect = 7e-39
 Identities = 98/178 (55%), Positives = 109/178 (61%), Gaps = 3/178 (1%)
 Frame = +3

Query: 57  MASSNNSVSEN--KKIKNGETSK-TAXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSREQR 227
           MASSNNSV+EN  KK K  +TS  T+                           GNS+EQ 
Sbjct: 1   MASSNNSVAENNKKKTKKPQTSTPTSKIKKDNKNIEKSKENNNKNKKKLNFTNGNSKEQE 60

Query: 228 QGGEKEAKRKRQKHXXXXXXXXXXXXXXKTHVFPMNRIRTMLKGEDPDLRVSQEALLAIN 407
           + G K+   K                  KTHVFPMNRIRTMLKGE  DLRVSQEA+LAIN
Sbjct: 61  ESGRKKKHAKDDDEEEDA----------KTHVFPMNRIRTMLKGEISDLRVSQEAILAIN 110

Query: 408 KAAEKFLESFTQEAYACSVQDRKKSLSYKHLSHVVSKQRKYDFLSDFVPEKVKAEDAL 581
            AAEKFLE   ++AY C  QDRKKSLSY HLS VVSKQ++YDFLSDFVPEKVKAEDAL
Sbjct: 111 NAAEKFLEQLAEDAYGCCAQDRKKSLSYNHLSRVVSKQKRYDFLSDFVPEKVKAEDAL 168


>ref|NP_001242442.1| uncharacterized protein LOC100793738 [Glycine max]
           gi|255635803|gb|ACU18250.1| unknown [Glycine max]
          Length = 234

 Score =  149 bits (375), Expect = 9e-34
 Identities = 88/179 (49%), Positives = 104/179 (58%), Gaps = 12/179 (6%)
 Frame = +3

Query: 81  SENKKIKNGETSKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSREQRQGGEKEAKRKR 260
           +E KK KN ET KT                            G ++  R+  ++E K+K 
Sbjct: 48  TEKKKTKNAETPKTEKKKNAEIPKIEKKKTKSAEIPLTD---GRTKRDREIAKEENKKKT 104

Query: 261 QK------------HXXXXXXXXXXXXXXKTHVFPMNRIRTMLKGEDPDLRVSQEALLAI 404
           +K                           K +VFPMNRIRTM+KGEDPD+RVSQEALLAI
Sbjct: 105 KKPKLSNGTSKQRDEGSKKGVAEGKGEEGKMNVFPMNRIRTMIKGEDPDMRVSQEALLAI 164

Query: 405 NKAAEKFLESFTQEAYACSVQDRKKSLSYKHLSHVVSKQRKYDFLSDFVPEKVKAEDAL 581
           N A EKFLE F+QEAYA  V+DRKK LSY HL+HVVSKQR+YDFLSDFVPE+VKAE AL
Sbjct: 165 NNAVEKFLEQFSQEAYAFCVRDRKKCLSYDHLAHVVSKQRRYDFLSDFVPERVKAEYAL 223


>ref|NP_001236469.1| uncharacterized protein LOC100500588 [Glycine max]
           gi|255630708|gb|ACU15715.1| unknown [Glycine max]
          Length = 201

 Score =  127 bits (319), Expect = 3e-27
 Identities = 87/206 (42%), Positives = 102/206 (49%), Gaps = 34/206 (16%)
 Frame = +3

Query: 57  MASSNNSVSENKK-IKNGETSKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSREQRQG 233
           MASSN    ENKK  K  E SK                               S+E+ + 
Sbjct: 1   MASSNTPKPENKKSTKKSEISKAEKKKTKNAEIPKTDGKTKKNKEI-------SQEENKK 53

Query: 234 GEKEAK------RKRQKHXXXXXXXXXXXXXXKTHVFPMNRIRTMLKGEDPDLRVSQEAL 395
             K+AK      ++R +               K +VFPMNRIRTM+KGEDP++RVSQEAL
Sbjct: 54  KIKKAKLSNGTSKQRDEGSKKGVAAEGNGEEAKMNVFPMNRIRTMIKGEDPEMRVSQEAL 113

Query: 396 LAINKAA---------------------------EKFLESFTQEAYACSVQDRKKSLSYK 494
            AIN                              EKFLE FTQ+AYA   QDRKK LSY 
Sbjct: 114 FAINNTVVGFLFLASSSPLFRCLYPSSFSSFSLQEKFLEQFTQDAYAFCAQDRKKCLSYD 173

Query: 495 HLSHVVSKQRKYDFLSDFVPEKVKAE 572
           HL+HVVSKQR+YDFLSDFVPE+VKAE
Sbjct: 174 HLAHVVSKQRRYDFLSDFVPERVKAE 199


>ref|XP_004170032.1| PREDICTED: uncharacterized protein LOC101228076 [Cucumis sativus]
          Length = 222

 Score =  123 bits (309), Expect = 4e-26
 Identities = 63/123 (51%), Positives = 83/123 (67%)
 Frame = +3

Query: 213 SREQRQGGEKEAKRKRQKHXXXXXXXXXXXXXXKTHVFPMNRIRTMLKGEDPDLRVSQEA 392
           SR+      K+ KR   K               K + FPM+RI+ +++ E+ DLR++QEA
Sbjct: 90  SRKSNTSKSKKVKRNHAKEEDNRYAAEEEAEE-KIYKFPMHRIKKIMRDENSDLRINQEA 148

Query: 393 LLAINKAAEKFLESFTQEAYACSVQDRKKSLSYKHLSHVVSKQRKYDFLSDFVPEKVKAE 572
           L  +NKA+E FL  F ++AYAC  QDRKKSL+YKHLS VVSK+++YDFLSDFVPEK+K E
Sbjct: 149 LFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFE 208

Query: 573 DAL 581
           DAL
Sbjct: 209 DAL 211


>ref|XP_004149539.1| PREDICTED: uncharacterized protein LOC101211039 [Cucumis sativus]
          Length = 221

 Score =  123 bits (309), Expect = 4e-26
 Identities = 63/123 (51%), Positives = 83/123 (67%)
 Frame = +3

Query: 213 SREQRQGGEKEAKRKRQKHXXXXXXXXXXXXXXKTHVFPMNRIRTMLKGEDPDLRVSQEA 392
           SR+      K+ KR   K               K + FPM+RI+ +++ E+ DLR++QEA
Sbjct: 89  SRKSNTSKSKKVKRNHAKEEDNRYAAEEEAEE-KIYKFPMHRIKKIMRDENSDLRINQEA 147

Query: 393 LLAINKAAEKFLESFTQEAYACSVQDRKKSLSYKHLSHVVSKQRKYDFLSDFVPEKVKAE 572
           L  +NKA+E FL  F ++AYAC  QDRKKSL+YKHLS VVSK+++YDFLSDFVPEK+K E
Sbjct: 148 LFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFE 207

Query: 573 DAL 581
           DAL
Sbjct: 208 DAL 210


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