BLASTX nr result

ID: Glycyrrhiza24_contig00028140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028140
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   324   8e-87
ref|XP_003610394.1| DEAD-box ATP-dependent RNA helicase [Medicag...   319   4e-85
ref|XP_003550503.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   313   3e-83
ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|2...   278   5e-73
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   273   2e-71

>ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Glycine max]
          Length = 472

 Score =  324 bits (831), Expect = 8e-87
 Identities = 160/174 (91%), Positives = 166/174 (95%)
 Frame = +2

Query: 2   VEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPSTSLLI 181
           VEPMPSRLYHRF ICDTKRKL TLLSLIQSDAP+SGIIFV EQSEKSKKAG APSTSLLI
Sbjct: 296 VEPMPSRLYHRFVICDTKRKLHTLLSLIQSDAPESGIIFVAEQSEKSKKAGKAPSTSLLI 355

Query: 182 DFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMTHIYN 361
           DFLKTSYQG LD+LLLED MNFNSRAASLLEVRKGGGYLLVATDIAARG DLPEM+HIYN
Sbjct: 356 DFLKTSYQGDLDILLLEDKMNFNSRAASLLEVRKGGGYLLVATDIAARGFDLPEMSHIYN 415

Query: 362 FDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 523
           FDLP+TAIDYLHRAGRTCRKPFSD+NCTVTSIIVP+ERFVLQRYENELMF CEE
Sbjct: 416 FDLPRTAIDYLHRAGRTCRKPFSDINCTVTSIIVPDERFVLQRYENELMFNCEE 469


>ref|XP_003610394.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|217074248|gb|ACJ85484.1| unknown [Medicago
           truncatula] gi|355511449|gb|AES92591.1| DEAD-box
           ATP-dependent RNA helicase [Medicago truncatula]
           gi|388507084|gb|AFK41608.1| unknown [Medicago
           truncatula]
          Length = 480

 Score =  319 bits (817), Expect = 4e-85
 Identities = 157/174 (90%), Positives = 165/174 (94%)
 Frame = +2

Query: 2   VEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPSTSLLI 181
           VEPMPSRL HRF +CD KRKLQTLLSLIQSDAP+SGIIFV EQSEKSKKAGN+PSTSL+I
Sbjct: 304 VEPMPSRLSHRFIVCDIKRKLQTLLSLIQSDAPESGIIFVSEQSEKSKKAGNSPSTSLVI 363

Query: 182 DFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMTHIYN 361
           DFLKTSY GSLD+LLLEDDMNFNSRAASLLEVRKGGGYLLVATD+AARGVD PEMTHIYN
Sbjct: 364 DFLKTSYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTHIYN 423

Query: 362 FDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 523
           +DLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIV +ERFVLQRYENEL FVC E
Sbjct: 424 YDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVSQERFVLQRYENELSFVCTE 477


>ref|XP_003550503.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           58, chloroplastic-like [Glycine max]
          Length = 277

 Score =  313 bits (801), Expect = 3e-83
 Identities = 157/174 (90%), Positives = 162/174 (93%)
 Frame = +2

Query: 2   VEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPSTSLLI 181
           VEPMPSRL HRF I DTKRKLQTLLSLIQSDAP+ GIIFV EQSEKSKKAG APSTSLLI
Sbjct: 101 VEPMPSRLXHRFIISDTKRKLQTLLSLIQSDAPEFGIIFVAEQSEKSKKAGKAPSTSLLI 160

Query: 182 DFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMTHIYN 361
           DFLKTSYQG LD+LLLED MNFNSRAASLLEVRKGGGYLLVATDIAAR VDLPEM HIYN
Sbjct: 161 DFLKTSYQGDLDILLLEDKMNFNSRAASLLEVRKGGGYLLVATDIAAREVDLPEMPHIYN 220

Query: 362 FDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 523
           FDLP+TAIDYLHRAGRTCRKPFSD+NCTVTSIIVP+ERFVLQRYENE MF CEE
Sbjct: 221 FDLPRTAIDYLHRAGRTCRKPFSDINCTVTSIIVPDERFVLQRYENEXMFNCEE 274


>ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|222864832|gb|EEF01963.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  278 bits (712), Expect = 5e-73
 Identities = 138/174 (79%), Positives = 153/174 (87%)
 Frame = +2

Query: 2   VEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPSTSLLI 181
           +EPMP+ L HRF IC  K++ QTLLSL+QSDAP SGIIFVGEQSEKSKKAGN P T  L+
Sbjct: 134 IEPMPTCLQHRFVICSKKQRHQTLLSLLQSDAPKSGIIFVGEQSEKSKKAGNGPPTIDLV 193

Query: 182 DFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMTHIYN 361
           DFLKTSY    ++LLLE+DMNFNSRAASL EVR+GGGYLLVATDIAARGVDLPE+THIYN
Sbjct: 194 DFLKTSYGDCSEILLLEEDMNFNSRAASLSEVRQGGGYLLVATDIAARGVDLPEITHIYN 253

Query: 362 FDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 523
           F+LP+TA+DYLHRAGRT RKPFSD  C VTSII+PEERFVLQRYENELMF CEE
Sbjct: 254 FNLPRTAVDYLHRAGRTGRKPFSDEKCNVTSIIMPEERFVLQRYENELMFNCEE 307


>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Vitis vinifera]
          Length = 482

 Score =  273 bits (699), Expect = 2e-71
 Identities = 134/174 (77%), Positives = 149/174 (85%)
 Frame = +2

Query: 2   VEPMPSRLYHRFTICDTKRKLQTLLSLIQSDAPDSGIIFVGEQSEKSKKAGNAPSTSLLI 181
           +EPMPS L+HRF IC+   + QTLLSL+ SDAP+ GIIFVGEQSEKSKKAGNAPS +LLI
Sbjct: 302 IEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFVGEQSEKSKKAGNAPSATLLI 361

Query: 182 DFLKTSYQGSLDVLLLEDDMNFNSRAASLLEVRKGGGYLLVATDIAARGVDLPEMTHIYN 361
           DFLKTSY G  D+LLLE+DMNFN RAASL EVR+ GGYLL++TDIAARGVDLPE THIYN
Sbjct: 362 DFLKTSYGGCPDILLLEEDMNFNLRAASLSEVRQRGGYLLISTDIAARGVDLPETTHIYN 421

Query: 362 FDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVPEERFVLQRYENELMFVCEE 523
           FDLP+T +DYLHRAGR  RKPFSD  C VT+II  EERFVLQRYENELMF CEE
Sbjct: 422 FDLPRTVVDYLHRAGRAARKPFSDQKCCVTNIITSEERFVLQRYENELMFHCEE 475


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