BLASTX nr result

ID: Glycyrrhiza24_contig00028133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028133
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
gb|ACZ74655.1| hypothetical protein [Phaseolus vulgaris] gi|2703...    92   3e-17
ref|XP_003618141.1| Pentatricopeptide repeat-containing protein ...    89   3e-16
ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containi...    63   2e-08
ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containi...    63   2e-08

>ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Glycine max]
          Length = 626

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/61 (73%), Positives = 52/61 (85%)
 Frame = +2

Query: 2   YNAVVKAFSEVGNVAELMELQDRLLKVGYVPNSLTCKHMIRRLQKDMELDDEILSHNMLE 181
           YNAVVK F +VGNVAEL+ELQD+LLKVGYV N LTCK++I  LQK ME DDE+L H+MLE
Sbjct: 566 YNAVVKVFCDVGNVAELLELQDKLLKVGYVSNRLTCKYVIHGLQKAMEQDDEMLGHDMLE 625

Query: 182 V 184
           V
Sbjct: 626 V 626


>gb|ACZ74655.1| hypothetical protein [Phaseolus vulgaris]
           gi|270342076|gb|ACZ74661.1| hypothetical protein
           [Phaseolus vulgaris]
          Length = 485

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/58 (72%), Positives = 51/58 (87%)
 Frame = +2

Query: 2   YNAVVKAFSEVGNVAELMELQDRLLKVGYVPNSLTCKHMIRRLQKDMELDDEILSHNM 175
           YNAVVK F +VGNV ELME++D+LLKVGYVPN LTC+H+I  LQK MELDDEIL+H++
Sbjct: 427 YNAVVKVFCDVGNVTELMEVEDKLLKVGYVPNKLTCRHVIHGLQKAMELDDEILNHSL 484


>ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493156|gb|AES74359.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 846

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/52 (78%), Positives = 48/52 (92%)
 Frame = +2

Query: 2   YNAVVKAFSEVGNVAELMELQDRLLKVGYVPNSLTCKHMIRRLQKDMELDDE 157
           YNA+VK F EVGNVAELMELQD+L+K+GYVPNSLTCK++IR LQK MELDD+
Sbjct: 583 YNAIVKVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRGLQKGMELDDD 634


>ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 636

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/52 (50%), Positives = 41/52 (78%)
 Frame = +2

Query: 2   YNAVVKAFSEVGNVAELMELQDRLLKVGYVPNSLTCKHMIRRLQKDMELDDE 157
           +N++VK + +VGN  +LMELQDR+LK G++PNSLTC+++I  + K M L+ +
Sbjct: 578 FNSLVKVYRDVGNETKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNKQ 629


>ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 632

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/52 (50%), Positives = 41/52 (78%)
 Frame = +2

Query: 2   YNAVVKAFSEVGNVAELMELQDRLLKVGYVPNSLTCKHMIRRLQKDMELDDE 157
           +N++VK + +VGN  +LMELQDR+LK G++PNSLTC+++I  + K M L+ +
Sbjct: 574 FNSLVKVYRDVGNETKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNKQ 625


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