BLASTX nr result

ID: Glycyrrhiza24_contig00028118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028118
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630831.1| 50S ribosomal protein L17 [Medicago truncatu...    89   4e-16
emb|CAN75856.1| hypothetical protein VITISV_005690 [Vitis vinifera]    84   1e-14
emb|CAN63185.1| hypothetical protein VITISV_000411 [Vitis vinifera]    84   1e-14
emb|CAN74064.1| hypothetical protein VITISV_028146 [Vitis vinifera]    84   2e-14
emb|CAN84135.1| hypothetical protein VITISV_000113 [Vitis vinifera]    83   3e-14

>ref|XP_003630831.1| 50S ribosomal protein L17 [Medicago truncatula]
           gi|355524853|gb|AET05307.1| 50S ribosomal protein L17
           [Medicago truncatula]
          Length = 438

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 67/163 (41%), Positives = 89/163 (54%)
 Frame = +2

Query: 38  DPNV*LMPNQKETYSDLGRYQRPVEKFELSHHGQTIYISNIPASNVSGFLDFPCDSHRDA 217
           DPNV L+PNQ E YSDLGRY+R V K  L++   T    + P S VS FL+ PCDSH +A
Sbjct: 131 DPNVKLLPNQGEPYSDLGRYRRLVGK--LNYLTLTRPDISFPVSVVSQFLNSPCDSHWNA 188

Query: 218 GCISSNFKIY*RFSWRG*FMKTKVMQILFCLYRC*LGMISHSY*KLISAYYVLIIGNLIS 397
             +    K   R + +G  + T         Y         S  +  S+Y + + GNLIS
Sbjct: 189 --VVRILKYIKRATGKG-LVFTDRGHTNIVGYSDADWAGDASDRRSTSSYCIFVGGNLIS 245

Query: 398 LKSKNRNVITRSSAEVKHRNMALSMHEFVWLK*LLQHLKFGKI 526
            KSK + V+ RSS E ++R MA +  E VWLK LLQ L F ++
Sbjct: 246 WKSKKQTVVARSSTEAEYRAMAHATSELVWLKHLLQELSFCEV 288


>emb|CAN75856.1| hypothetical protein VITISV_005690 [Vitis vinifera]
          Length = 268

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 69/167 (41%), Positives = 89/167 (53%), Gaps = 5/167 (2%)
 Frame = +2

Query: 38  DPNV*LMPNQKETYSDLGRYQRPVEKFELSHHGQTIYISNIPASNVSGFLDFPCDSHRDA 217
           DPNV L+P Q E   D GRY+R V K  L++   T    + P S VS FL  PCDSH DA
Sbjct: 102 DPNVKLVPGQGEPLGDPGRYRRLVGK--LNYLTITRPDISFPVSVVSQFLQSPCDSHWDA 159

Query: 218 GC-----ISSNFKIY*RFSWRG*FMKTKVMQILFCLYRC*LGMISHSY*KLISAYYVLII 382
                  I S       +  RG    T+V+      +       S +  +  S Y V I 
Sbjct: 160 VIRILRYIKSTPGQGVLYENRG---HTQVVGYTDADWAG-----SPTDRRSTSGYCVFIG 211

Query: 383 GNLISLKSKNRNVITRSSAEVKHRNMALSMHEFVWLK*LLQHLKFGK 523
           GNLIS KSK ++V+ RSSAE ++R MAL+  E +WL+ LLQ L+FGK
Sbjct: 212 GNLISWKSKKQDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGK 258


>emb|CAN63185.1| hypothetical protein VITISV_000411 [Vitis vinifera]
          Length = 577

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 65/162 (40%), Positives = 87/162 (53%)
 Frame = +2

Query: 38  DPNV*LMPNQKETYSDLGRYQRPVEKFELSHHGQTIYISNIPASNVSGFLDFPCDSHRDA 217
           DPNV L+P Q E   D GRY+R V K  L++   T    + P S VS FL  PCDSH D 
Sbjct: 330 DPNVKLVPGQGEPLGDPGRYRRLVGK--LNYLTITRPDISFPVSVVSQFLQSPCDSHWDV 387

Query: 218 GCISSNFKIY*RFSWRG*FMKTKVMQILFCLYRC*LGMISHSY*KLISAYYVLIIGNLIS 397
             +    +       +G   + +    +F  Y       S +  +  S Y V I GNLIS
Sbjct: 388 --VIRILRYIKSTPGQGMLYENRGHTQVFG-YTDTDWAGSPTNRRSTSGYCVFIGGNLIS 444

Query: 398 LKSKNRNVITRSSAEVKHRNMALSMHEFVWLK*LLQHLKFGK 523
            KSK ++V+ RSSAE ++R MAL+  E +WL+ LLQ L+FGK
Sbjct: 445 WKSKKQDVVVRSSAEAEYRAMALATCELIWLRHLLQELRFGK 486


>emb|CAN74064.1| hypothetical protein VITISV_028146 [Vitis vinifera]
          Length = 1203

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 68/167 (40%), Positives = 89/167 (53%), Gaps = 5/167 (2%)
 Frame = +2

Query: 38   DPNV*LMPNQKETYSDLGRYQRPVEKFELSHHGQTIYISNIPASNVSGFLDFPCDSHRDA 217
            DPNV L+P Q E   D GRY+R V K  L++   T    + P S VS FL  PCDSH DA
Sbjct: 962  DPNVKLVPGQGEPLGDXGRYRRLVGK--LNYLTITRPDISFPVSVVSQFLQSPCDSHWDA 1019

Query: 218  GC-----ISSNFKIY*RFSWRG*FMKTKVMQILFCLYRC*LGMISHSY*KLISAYYVLII 382
                   I S       +  RG    T+V+      +       S +  +  S Y V I 
Sbjct: 1020 VIRILRYIKSTPGQGVLYENRG---HTQVVGYTDVDWAG-----SPTDRRSTSGYCVFIG 1071

Query: 383  GNLISLKSKNRNVITRSSAEVKHRNMALSMHEFVWLK*LLQHLKFGK 523
            GNLIS KSK ++V+ RSSAE ++R MAL+  E +WL+ LL+ L+FGK
Sbjct: 1072 GNLISWKSKKQDVVARSSAEAEYRXMALATCELIWLRHLLRELRFGK 1118


>emb|CAN84135.1| hypothetical protein VITISV_000113 [Vitis vinifera]
          Length = 1323

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 69/169 (40%), Positives = 87/169 (51%), Gaps = 7/169 (4%)
 Frame = +2

Query: 38   DPNV*LMPNQKETYSDLGRYQRPVEKFELSHHGQTIYISNI--PASNVSGFLDFPCDSHR 211
            DPNV L+P Q E   D GRY+R V K        TI   +I  P S VS FL  PCDSH 
Sbjct: 1082 DPNVKLVPGQGEPLGDPGRYRRLVGKLNYL----TITRPDIFFPVSVVSQFLQSPCDSHW 1137

Query: 212  DAGC-----ISSNFKIY*RFSWRG*FMKTKVMQILFCLYRC*LGMISHSY*KLISAYYVL 376
            DA       I S       +  RG    T+V+      +       S +  +  S Y V 
Sbjct: 1138 DAVIRILRYIKSTLGQGVLYENRG---HTQVVGYTDADWAG-----SPTDRRSTSGYCVF 1189

Query: 377  IIGNLISLKSKNRNVITRSSAEVKHRNMALSMHEFVWLK*LLQHLKFGK 523
            I GNLIS KSK ++V+ RSS E ++R MAL+  E +WL+ LLQ L+FGK
Sbjct: 1190 IGGNLISWKSKKQDVVVRSSVEAEYRAMALATCELIWLRHLLQELRFGK 1238


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