BLASTX nr result

ID: Glycyrrhiza24_contig00028112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028112
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   143   1e-32
ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...   141   6e-32
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]   139   2e-31
ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-...   137   1e-30
ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-...   132   3e-29

>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355513943|gb|AES95566.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 1723

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/81 (82%), Positives = 75/81 (92%)
 Frame = +2

Query: 2   NDFNGKSVGTITTSQLFVEPDFAEAYTLREWFDREGRNVPSLSISRESSSFGKTDVRKTI 181
           NDFNGKS+GTI TSQL VEPDF EA+TLR WFD+EGRNVPS SISRESSSFGK++V+KTI
Sbjct: 477 NDFNGKSIGTIATSQLLVEPDFPEAFTLRGWFDQEGRNVPSQSISRESSSFGKSEVQKTI 536

Query: 182 SQIKDEKLGTSEKPDWISVCA 244
           SQIKDE LGTS+KPDWIS+CA
Sbjct: 537 SQIKDENLGTSDKPDWISICA 557


>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Vitis vinifera]
          Length = 882

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/81 (80%), Positives = 75/81 (92%)
 Frame = +2

Query: 2   NDFNGKSVGTITTSQLFVEPDFAEAYTLREWFDREGRNVPSLSISRESSSFGKTDVRKTI 181
           NDFNGK+VGTI+TSQLF+EPDF EA  L+EWFD+EGRN PS+SISRE +S G+TDVRKTI
Sbjct: 479 NDFNGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTSMGRTDVRKTI 538

Query: 182 SQIKDEKLGTSEKPDWISVCA 244
           SQIKDE+LGTSEKPDWI+VCA
Sbjct: 539 SQIKDERLGTSEKPDWITVCA 559


>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
          Length = 882

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/81 (79%), Positives = 74/81 (91%)
 Frame = +2

Query: 2   NDFNGKSVGTITTSQLFVEPDFAEAYTLREWFDREGRNVPSLSISRESSSFGKTDVRKTI 181
           NDFNGK+VGTI+TSQLF+EPDF EA  L+EWFD+EGRN PS+SISRE +  G+TDVRKTI
Sbjct: 479 NDFNGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTXMGRTDVRKTI 538

Query: 182 SQIKDEKLGTSEKPDWISVCA 244
           SQIKDE+LGTSEKPDWI+VCA
Sbjct: 539 SQIKDERLGTSEKPDWITVCA 559


>ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 894

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/81 (81%), Positives = 73/81 (90%)
 Frame = +2

Query: 2   NDFNGKSVGTITTSQLFVEPDFAEAYTLREWFDREGRNVPSLSISRESSSFGKTDVRKTI 181
           NDFNGKSVGTI TSQL+VEPDF EA TL+ WF+ EG++VP+LSISRE S+ GKTDVRKTI
Sbjct: 459 NDFNGKSVGTIATSQLYVEPDFPEACTLKRWFENEGKSVPTLSISREISNLGKTDVRKTI 518

Query: 182 SQIKDEKLGTSEKPDWISVCA 244
           SQIKDEKLGTSEKPDWISV A
Sbjct: 519 SQIKDEKLGTSEKPDWISVFA 539


>ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 425

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/81 (76%), Positives = 75/81 (92%)
 Frame = +2

Query: 2   NDFNGKSVGTITTSQLFVEPDFAEAYTLREWFDREGRNVPSLSISRESSSFGKTDVRKTI 181
           +DFNGK+VGTI+TSQLF+EPDF EA++LREWF+REGR+  S+SISRE +S G+TDVRKTI
Sbjct: 39  SDFNGKAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTI 98

Query: 182 SQIKDEKLGTSEKPDWISVCA 244
           SQIKDE+LGTSEKPDWI+V A
Sbjct: 99  SQIKDERLGTSEKPDWITVSA 119


Top