BLASTX nr result

ID: Glycyrrhiza24_contig00028065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028065
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545739.1| PREDICTED: protein strawberry notch-like [Gl...    73   2e-11
ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...    73   2e-11
ref|NP_178053.4| RING/FYVE/PHD zinc finger domain-containing pro...    71   8e-11
ref|XP_002889240.1| EMB1135 [Arabidopsis lyrata subsp. lyrata] g...    71   8e-11
dbj|BAF00787.1| hypothetical protein [Arabidopsis thaliana]            71   8e-11

>ref|XP_003545739.1| PREDICTED: protein strawberry notch-like [Glycine max]
          Length = 1252

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = -1

Query: 334  KRLRVVRIETTSDNQQTVGLLVPNAAVQTVLQGLAWVQEVDD 209
            +RLRVVRIETT D Q+ VGLLVPNAAV+TVLQGLAWVQE+DD
Sbjct: 1211 RRLRVVRIETTVDTQRIVGLLVPNAAVETVLQGLAWVQEIDD 1252


>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = -1

Query: 334  KRLRVVRIETTSDNQQTVGLLVPNAAVQTVLQGLAWVQEVDD 209
            +RLRVVRIETT D Q+ VGLLVPNAAV+TVLQGLAWVQE+DD
Sbjct: 4372 RRLRVVRIETTVDTQRIVGLLVPNAAVETVLQGLAWVQEIDD 4413


>ref|NP_178053.4| RING/FYVE/PHD zinc finger domain-containing protein [Arabidopsis
            thaliana] gi|332198112|gb|AEE36233.1| RING/FYVE/PHD zinc
            finger domain-containing protein [Arabidopsis thaliana]
          Length = 1295

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = -1

Query: 334  KRLRVVRIETTSDNQQTVGLLVPNAAVQTVLQGLAWVQEVDD 209
            KR+RV+RIETT+DNQ+ VGL +PNAAV+TVLQ LAWVQE+DD
Sbjct: 1254 KRIRVIRIETTTDNQRIVGLSIPNAAVETVLQDLAWVQEIDD 1295


>ref|XP_002889240.1| EMB1135 [Arabidopsis lyrata subsp. lyrata]
            gi|297335081|gb|EFH65499.1| EMB1135 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1299

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = -1

Query: 334  KRLRVVRIETTSDNQQTVGLLVPNAAVQTVLQGLAWVQEVDD 209
            KR+RV+RIETT+DNQ+ VGL +PNAAV+TVLQ LAWVQE+DD
Sbjct: 1258 KRIRVIRIETTTDNQRIVGLSIPNAAVETVLQDLAWVQEIDD 1299


>dbj|BAF00787.1| hypothetical protein [Arabidopsis thaliana]
          Length = 624

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = -1

Query: 334 KRLRVVRIETTSDNQQTVGLLVPNAAVQTVLQGLAWVQEVDD 209
           KR+RV+RIETT+DNQ+ VGL +PNAAV+TVLQ LAWVQE+DD
Sbjct: 583 KRIRVIRIETTTDNQRIVGLSIPNAAVETVLQDLAWVQEIDD 624


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