BLASTX nr result

ID: Glycyrrhiza24_contig00028063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028063
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628875.1| Rhamnogalacturonate lyase [Medicago truncatu...   429   e-118
ref|XP_003531974.1| PREDICTED: LOW QUALITY PROTEIN: probable rha...   413   e-113
ref|XP_003628880.1| Rhamnogalacturonate lyase [Medicago truncatu...   412   e-113
ref|XP_003628876.1| Rhamnogalacturonate lyase [Medicago truncatu...   385   e-105
ref|XP_003517685.1| PREDICTED: rhamnogalacturonate lyase-like [G...   344   1e-92

>ref|XP_003628875.1| Rhamnogalacturonate lyase [Medicago truncatula]
            gi|355522897|gb|AET03351.1| Rhamnogalacturonate lyase
            [Medicago truncatula]
          Length = 684

 Score =  429 bits (1104), Expect = e-118
 Identities = 196/235 (83%), Positives = 219/235 (93%)
 Frame = -1

Query: 705  GDYNLYAWVPGYIGDYRYNATITITPGGVMKLDTLVYSPPRNGPTLWEIGIPDRLASEFY 526
            GDYNLY WVPG+IGDY+YN TITITPGGV+ L+ LVY+PPRNGPT+WEIGIP+RLASEF+
Sbjct: 445  GDYNLYGWVPGFIGDYKYNGTITITPGGVINLNYLVYNPPRNGPTIWEIGIPNRLASEFH 504

Query: 525  VPDPYPTLMNKLYNEQRRDKFRQYGLWERYTDLYPNDDLVYTVGVDKYRKDWFYAQVTRS 346
            VPDPYPTLMNKLY  QRRDKFRQYGLWERYTD+YPNDDL+YTVGV+KYR DWFYA VTRS
Sbjct: 505  VPDPYPTLMNKLYTAQRRDKFRQYGLWERYTDMYPNDDLIYTVGVNKYR-DWFYAHVTRS 563

Query: 345  TGNKTYEPTTWQIIFEHRNDILSGSYTLQLALASASDANLQVRFNDPSVYPPHFETGHIG 166
             GNKTYEPTTWQIIFEH  DI+SG+YTLQLALASA+DA+LQVRFNDPS+YPPHF TG IG
Sbjct: 564  KGNKTYEPTTWQIIFEHEQDIISGNYTLQLALASAADADLQVRFNDPSIYPPHFATGLIG 623

Query: 165  GDNAIARHGIHGLYWMFSIDVPSNLLVKGKNTIYLRPSRAINQFQGVMYDYIRLE 1
            GDNAIARHGIHGL+W+FSIDVPS+LLVKGKN +YLR S+A++ FQGVMYDYIRLE
Sbjct: 624  GDNAIARHGIHGLHWLFSIDVPSDLLVKGKNIVYLRQSKALSPFQGVMYDYIRLE 678


>ref|XP_003531974.1| PREDICTED: LOW QUALITY PROTEIN: probable rhamnogalacturonate lyase
            B-like [Glycine max]
          Length = 685

 Score =  413 bits (1062), Expect = e-113
 Identities = 189/235 (80%), Positives = 210/235 (89%)
 Frame = -1

Query: 705  GDYNLYAWVPGYIGDYRYNATITITPGGVMKLDTLVYSPPRNGPTLWEIGIPDRLASEFY 526
            GDYN YAW+PG+IGDYRYNATITIT GGV+KLD+LVY PPRNGPTLWEIG PDR ++EFY
Sbjct: 444  GDYNFYAWIPGFIGDYRYNATITITQGGVIKLDSLVYVPPRNGPTLWEIGFPDRTSAEFY 503

Query: 525  VPDPYPTLMNKLYNEQRRDKFRQYGLWERYTDLYPNDDLVYTVGVDKYRKDWFYAQVTRS 346
            VPDPYPTLMNKLYNE+ RDKFRQYGLWERYTDLYPNDDLVYTVGV KYRKDWFYA VTRS
Sbjct: 504  VPDPYPTLMNKLYNEEHRDKFRQYGLWERYTDLYPNDDLVYTVGVSKYRKDWFYAHVTRS 563

Query: 345  TGNKTYEPTTWQIIFEHRNDILSGSYTLQLALASASDANLQVRFNDPSVYPPHFETGHIG 166
            TGNKTY+PTTWQI+FEH N I+ G+YTLQLALA  +DA+LQVR N+PS  PP F TG +G
Sbjct: 564  TGNKTYQPTTWQIVFEHPNQIIRGNYTLQLALACTADADLQVRVNNPSANPPDFATGKMG 623

Query: 165  GDNAIARHGIHGLYWMFSIDVPSNLLVKGKNTIYLRPSRAINQFQGVMYDYIRLE 1
            GD+AIARHG+HGLY +FSI+VPS+  VKG NTIYLR SRA+N FQGVMYDYIRLE
Sbjct: 624  GDSAIARHGVHGLYRLFSINVPSDRFVKGTNTIYLRQSRAMNPFQGVMYDYIRLE 678


>ref|XP_003628880.1| Rhamnogalacturonate lyase [Medicago truncatula]
            gi|355522902|gb|AET03356.1| Rhamnogalacturonate lyase
            [Medicago truncatula]
          Length = 688

 Score =  412 bits (1060), Expect = e-113
 Identities = 192/235 (81%), Positives = 216/235 (91%)
 Frame = -1

Query: 705  GDYNLYAWVPGYIGDYRYNATITITPGGVMKLDTLVYSPPRNGPTLWEIGIPDRLASEFY 526
            GDYNLYAWVPG+IGDY+YNATITITPGGV+KL++LVY+PPRNGPT+WEIGIPDRLASEF+
Sbjct: 450  GDYNLYAWVPGFIGDYKYNATITITPGGVIKLNSLVYNPPRNGPTIWEIGIPDRLASEFH 509

Query: 525  VPDPYPTLMNKLYNEQRRDKFRQYGLWERYTDLYPNDDLVYTVGVDKYRKDWFYAQVTRS 346
            +PDPYPTLMNKLY ++  DKFRQYGLW+RY+D+YPNDDLVYTVGV+ YR DWF+A VTRS
Sbjct: 510  IPDPYPTLMNKLYTKKHSDKFRQYGLWKRYSDIYPNDDLVYTVGVNNYR-DWFFAHVTRS 568

Query: 345  TGNKTYEPTTWQIIFEHRNDILSGSYTLQLALASASDANLQVRFNDPSVYPPHFETGHIG 166
            TGNKTYEPTTWQIIFEH+NDI+SG+YTLQLALASA+D+NLQVRFND S  PPHF TG IG
Sbjct: 569  TGNKTYEPTTWQIIFEHKNDIISGNYTLQLALASAADSNLQVRFNDRSKDPPHFATGRIG 628

Query: 165  GDNAIARHGIHGLYWMFSIDVPSNLLVKGKNTIYLRPSRAINQFQGVMYDYIRLE 1
             DNAIARHGIHGLY +FSI+V SNLLVKGKN IYLR S+A   FQGVMYDYIRLE
Sbjct: 629  RDNAIARHGIHGLYRLFSINVSSNLLVKGKNIIYLRQSKADTPFQGVMYDYIRLE 683


>ref|XP_003628876.1| Rhamnogalacturonate lyase [Medicago truncatula]
            gi|355522898|gb|AET03352.1| Rhamnogalacturonate lyase
            [Medicago truncatula]
          Length = 694

 Score =  385 bits (988), Expect = e-105
 Identities = 182/238 (76%), Positives = 207/238 (86%), Gaps = 3/238 (1%)
 Frame = -1

Query: 705  GDYNLYAWVPGYIGDYRYNATITITPGGVMKLDTLVYSPPRNGPTLWEIGIPDRLASEFY 526
            G YNL+ WV G+IGDY+YN+TITITPGGV+KL++LVY+PPRNGPT+WEIGIPDRL SEF+
Sbjct: 454  GHYNLFGWVSGFIGDYKYNSTITITPGGVIKLNSLVYNPPRNGPTIWEIGIPDRLTSEFH 513

Query: 525  VPDPYPTLMNKLYNEQRRDKFRQYGLWERYTDLYPNDDLVYTVGVDKYRKDWFYAQVTRS 346
            VP+PYPTLMNKLY E  RD FRQYGLWERYT++YP DDL+YT+GV+K  KDWFYA VTR+
Sbjct: 514  VPEPYPTLMNKLYTE-GRDNFRQYGLWERYTEMYPTDDLIYTLGVNK-NKDWFYAHVTRN 571

Query: 345  TGNKTYEPTTWQIIFEHRNDILSGSYTLQLALASASDANLQVRFNDPSVYPPHFETGHIG 166
            T N TYEPTTWQIIFEH++D+ SG+YTLQLALASA+DA LQVRFND SVYPPHF TGHIG
Sbjct: 572  TENNTYEPTTWQIIFEHQHDLKSGNYTLQLALASAADAYLQVRFNDRSVYPPHFATGHIG 631

Query: 165  ---GDNAIARHGIHGLYWMFSIDVPSNLLVKGKNTIYLRPSRAINQFQGVMYDYIRLE 1
               GDN I RHGIHGLY +FSIDVPSNLL+KGKN IYL  + A   FQGVMYDYIRLE
Sbjct: 632  RIRGDNCIQRHGIHGLYRLFSIDVPSNLLLKGKNIIYLTQTNADTPFQGVMYDYIRLE 689


>ref|XP_003517685.1| PREDICTED: rhamnogalacturonate lyase-like [Glycine max]
          Length = 695

 Score =  344 bits (882), Expect = 1e-92
 Identities = 160/235 (68%), Positives = 187/235 (79%)
 Frame = -1

Query: 705  GDYNLYAWVPGYIGDYRYNATITITPGGVMKLDTLVYSPPRNGPTLWEIGIPDRLASEFY 526
            GDYNLYAWVPG+IGDYRY   ITI PG  + L++LVY+PPRNGPTLWEIGIPDR A+EFY
Sbjct: 454  GDYNLYAWVPGFIGDYRYQTKITIKPGCNINLNSLVYNPPRNGPTLWEIGIPDRSAAEFY 513

Query: 525  VPDPYPTLMNKLYNEQRRDKFRQYGLWERYTDLYPNDDLVYTVGVDKYRKDWFYAQVTRS 346
            +PDP P   N+L+    +DKFRQYGLWERYT+LYPN DLVYTVGV  Y  DWFYAQVTRS
Sbjct: 514  IPDPNPKFTNRLFQNDSQDKFRQYGLWERYTELYPNHDLVYTVGVSDYHNDWFYAQVTRS 573

Query: 345  TGNKTYEPTTWQIIFEHRNDILSGSYTLQLALASASDANLQVRFNDPSVYPPHFETGHIG 166
            T  KT+ PTTWQI F+ +N I+ G+YTLQ+ LASA++A L+VRFND +   PHF TG  G
Sbjct: 574  TPEKTFVPTTWQIQFQLKNIIMPGNYTLQVGLASANNARLEVRFNDQNAKLPHFSTGLTG 633

Query: 165  GDNAIARHGIHGLYWMFSIDVPSNLLVKGKNTIYLRPSRAINQFQGVMYDYIRLE 1
             DNAIARHGIHGLY +++I V SN LVKGKNTIYL  S+ I  F G+MYDY+RLE
Sbjct: 634  DDNAIARHGIHGLYRLYTIAVGSNHLVKGKNTIYLTQSKGIGPFMGLMYDYVRLE 688


Top