BLASTX nr result

ID: Glycyrrhiza24_contig00028056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028056
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532339.1| PREDICTED: LOB domain-containing protein 41-...    82   5e-14
ref|XP_003555129.1| PREDICTED: LOB domain-containing protein 41-...    72   5e-11
ref|XP_003552728.1| PREDICTED: LOB domain-containing protein 41-...    72   6e-11
gb|AFK42949.1| unknown [Medicago truncatula]                           71   1e-10
ref|XP_003618732.1| LOB domain-containing protein [Medicago trun...    70   2e-10

>ref|XP_003532339.1| PREDICTED: LOB domain-containing protein 41-like [Glycine max]
          Length = 296

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 51/92 (55%), Positives = 58/92 (63%), Gaps = 6/92 (6%)
 Frame = +2

Query: 8   SHESSLSHPCKXXXXXXXXXXXX-----LFHDEPESNPNPNEIDRAEESGDEVGLELTLG 172
           SH+S+LSH  +                 LF DEPESNP    +DR     D+VGLELTLG
Sbjct: 205 SHDSTLSHQSEAANAVESESILSAETSILFRDEPESNPK--RLDRT----DDVGLELTLG 258

Query: 173 FEPVSRADHVVPVKKRRTELKDWS-VSCKMEL 265
           FEPVS A HVVPVKKRR +LKD+S  SCKMEL
Sbjct: 259 FEPVSGAQHVVPVKKRRIDLKDFSGSSCKMEL 290


>ref|XP_003555129.1| PREDICTED: LOB domain-containing protein 41-like [Glycine max]
          Length = 293

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 49/105 (46%), Positives = 56/105 (53%), Gaps = 19/105 (18%)
 Frame = +2

Query: 8   SHESSLSH----------PCKXXXXXXXXXXXXLFHDEPESNPNPNEIDRAEESGDEVGL 157
           SHES LSH            K            LFH+EPES    +  DR  ESG+E+GL
Sbjct: 188 SHESGLSHLSEAAVMVEGESKESESDVSVETSNLFHEEPESVAKTS--DRTGESGNEIGL 245

Query: 158 ELTLGFEPVSRADHVVPVKKRR---------TELKDWSVSCKMEL 265
           ELTLGFEPVSR  HVVP+KKR+         +  KD   SCKMEL
Sbjct: 246 ELTLGFEPVSRVHHVVPMKKRKIIASKSYGDSAEKD---SCKMEL 287


>ref|XP_003552728.1| PREDICTED: LOB domain-containing protein 41-like [Glycine max]
          Length = 301

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 47/99 (47%), Positives = 56/99 (56%), Gaps = 13/99 (13%)
 Frame = +2

Query: 8   SHESSLSHPCKXXXXXXXXXXXX--------LFHDEPESNPNPNEIDRAEESGDEVGLEL 163
           SH+S+LSH  +                    LF +EPE+NP        +   D+VGLEL
Sbjct: 205 SHDSTLSHQSEAANAVESESMLSAETPETSILFREEPETNP--------KRVSDDVGLEL 256

Query: 164 TLGFEPVSRADHVVPVKKRRTELKDW-----SVSCKMEL 265
           TLGFEPVSRA  VVPVKKRR ELK++     S SCKMEL
Sbjct: 257 TLGFEPVSRARPVVPVKKRRIELKNFSGSAESGSCKMEL 295


>gb|AFK42949.1| unknown [Medicago truncatula]
          Length = 287

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/88 (50%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
 Frame = +2

Query: 8   SHESSLSHPCKXXXXXXXXXXXX-------LFHDEPESNPNPNEIDRAEESGDE-VGLEL 163
           SHESS+SH  +                   LF DEPE +      DR  E+G+E VGLEL
Sbjct: 187 SHESSISHQSEAVAVVDGESKDSESETSMILFRDEPELDRKMKPADRTGENGEEKVGLEL 246

Query: 164 TLGFEPVSRADHVVPVKKRRTELKDWSV 247
           TLG EPVSR  HVVPVKKRR  LKD  V
Sbjct: 247 TLGLEPVSRVYHVVPVKKRRVVLKDCGV 274


>ref|XP_003618732.1| LOB domain-containing protein [Medicago truncatula]
           gi|355493747|gb|AES74950.1| LOB domain-containing
           protein [Medicago truncatula]
          Length = 278

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 45/93 (48%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
 Frame = +2

Query: 8   SHESSLSHPCKXXXXXXXXXXXXLFHDEPESNPNPNEI------DRAEES-GDEVGLELT 166
           S ESSLS P K            LFHDE E  P            RAEE   D VGLEL 
Sbjct: 180 SQESSLSQPGKDSESGVSVETSILFHDESEFEPESQAKVKGRAEGRAEEGLSDGVGLELR 239

Query: 167 LGFEPVSRADHVVPVKKRRTELKDWSVSCKMEL 265
           LG EPVSR + +VP+KKR+  LKD S S K+EL
Sbjct: 240 LGIEPVSREEFMVPIKKRKIVLKDCSASSKVEL 272


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