BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028039
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I sub...   241   6e-62
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   239   2e-61
ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer...   190   9e-47
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   189   3e-46
emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]   160   8e-38

>ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
           max]
          Length = 1175

 Score =  241 bits (614), Expect = 6e-62
 Identities = 113/130 (86%), Positives = 120/130 (92%)
 Frame = +3

Query: 132 MVVKPGSVPDFEALRELFKPHIESFDYMVDAGLETMFRHIKPVEVIDPFTSAKLRYWLDN 311
           MVVK GS+PDFEALRELFK HIESFDYM DAGLETM RHIKP+EV D FTS KLR WLDN
Sbjct: 1   MVVKQGSIPDFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDN 60

Query: 312 PVLYPPQKERISKTMREALLPFECRQAKITYAGKFTADVCFQYNNGPVIRENLNFGQFPI 491
           PVLYPPQKERIS+TMREALLPFECRQAKI+YAGK T DVCFQYN+GP+IREN+NFGQFPI
Sbjct: 61  PVLYPPQKERISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPI 120

Query: 492 MLQSKLCNLR 521
           MLQSKLCNLR
Sbjct: 121 MLQSKLCNLR 130


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
           max]
          Length = 1175

 Score =  239 bits (610), Expect = 2e-61
 Identities = 113/130 (86%), Positives = 120/130 (92%)
 Frame = +3

Query: 132 MVVKPGSVPDFEALRELFKPHIESFDYMVDAGLETMFRHIKPVEVIDPFTSAKLRYWLDN 311
           MV KPGSVPDFEALRELFK HIESFDYMVDAGL+TM  HIKPVEV D FTS KLR WLDN
Sbjct: 1   MVAKPGSVPDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDN 60

Query: 312 PVLYPPQKERISKTMREALLPFECRQAKITYAGKFTADVCFQYNNGPVIRENLNFGQFPI 491
           PVLYPPQKERIS+TMREALLPFECRQAKI+Y+GK T DVCFQYN+GP+IREN+NFGQFPI
Sbjct: 61  PVLYPPQKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPI 120

Query: 492 MLQSKLCNLR 521
           MLQSKLCNLR
Sbjct: 121 MLQSKLCNLR 130


>ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit
           RPA2-like, partial [Cucumis sativus]
          Length = 948

 Score =  190 bits (483), Expect = 9e-47
 Identities = 92/130 (70%), Positives = 106/130 (81%)
 Frame = +3

Query: 132 MVVKPGSVPDFEALRELFKPHIESFDYMVDAGLETMFRHIKPVEVIDPFTSAKLRYWLDN 311
           MVVK     D+EALRELF+ HIESFD++VDAGLET+   IKPVE+ D FT+ KLR WL  
Sbjct: 1   MVVKFNENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGK 60

Query: 312 PVLYPPQKERISKTMREALLPFECRQAKITYAGKFTADVCFQYNNGPVIRENLNFGQFPI 491
           P LYPPQKER  +T+REALLP+ECRQAKI+Y GKF ADVCFQY+   VIRE LNFGQFPI
Sbjct: 61  PELYPPQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKLNFGQFPI 120

Query: 492 MLQSKLCNLR 521
           ML+SKLC+LR
Sbjct: 121 MLKSKLCHLR 130


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
           sativus]
          Length = 1173

 Score =  189 bits (479), Expect = 3e-46
 Identities = 91/130 (70%), Positives = 105/130 (80%)
 Frame = +3

Query: 132 MVVKPGSVPDFEALRELFKPHIESFDYMVDAGLETMFRHIKPVEVIDPFTSAKLRYWLDN 311
           MVVK     D+EALRELF+ HIESFD++VDAGLET+   IKPVE+ D FT+ KLR WL  
Sbjct: 1   MVVKFNENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGK 60

Query: 312 PVLYPPQKERISKTMREALLPFECRQAKITYAGKFTADVCFQYNNGPVIRENLNFGQFPI 491
           P LYPPQKER  +T+REALLP+ECRQAKI+Y GKF ADVCFQY+   VIRE  NFGQFPI
Sbjct: 61  PELYPPQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPI 120

Query: 492 MLQSKLCNLR 521
           ML+SKLC+LR
Sbjct: 121 MLKSKLCHLR 130


>emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]
          Length = 416

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/127 (59%), Positives = 95/127 (74%), Gaps = 5/127 (3%)
 Frame = +3

Query: 156 PDFEALRELFKPHIESFDYMVDAGLETMFRHIKPVEVI-----DPFTSAKLRYWLDNPVL 320
           PD+E LRELF+ HI+SFD++V+ GLET+   +KPVE +       F   ++  W   P L
Sbjct: 6   PDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVESLFITHNGVFFLTRIALWFGQPEL 65

Query: 321 YPPQKERISKTMREALLPFECRQAKITYAGKFTADVCFQYNNGPVIRENLNFGQFPIMLQ 500
           YPPQKER ++TMR+AL PFECRQAKI+Y+GK  ADVCFQY NG VIRE  N GQFP+ML+
Sbjct: 66  YPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVVIREKFNLGQFPMMLK 125

Query: 501 SKLCNLR 521
           SKLC+LR
Sbjct: 126 SKLCHLR 132